RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 KCNC3Q14003 757 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 RCN1Q15293 331 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 GAB4Q2WGN9 574 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZNF805Q5CZA5 627 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 Q6ZVL8 140 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 DET1Q7L5Y6 550 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 CFAP61Q8NHU2 1237 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 KCNV2Q8TDN2 545 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ULK4Q96C45 1275 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 NKX2-4Q9H2Z4 354 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 NOP53Q9NZM5 478 aaKnown RBP17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 IGLV3-16A0A075B6K0 115 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 FFAR2O15552 330 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 PSMG1O95456 288 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ANP32DO95626 131 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 NFATC1O95644 943 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 MLYCDO95822 493 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 GUCA1CO95843 209 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ALDOCP09972 364 aaKnown RBP17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ETV3P41162 512 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ST8SIA6P61647 398 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 C6orf163Q5TEZ5 329 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 PGM2L1Q6PCE3 622 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 DSELQ8IZU8 1212 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 DCBLD1Q8N8Z6 715 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 KYQ8NBH2 561 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 OR56A4Q8NGH8 313 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 STMN2Q93045 179 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 FAM126AQ9BYI3 521 aaPredicted RBP17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 PBX4Q9BYU1 374 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 RAD51BO15315 384 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 CCNT2O60583 730 aaKnown RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 PAPLNO95428 1278 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 ESRRBO95718 433 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 S100BP04271 92 aaPredicted RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 XPAP23025 273 aaPredicted RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 VASPP50552 380 aaPredicted RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 NAA20P61599 178 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 FASTKQ14296 549 aaKnown RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 GRB7Q14451 532 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 PHKG1Q16816 387 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 AGKQ53H12 422 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 SFTPA1Q8IWL2 248 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 DLG3Q92796 817 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 CCDC124Q96CT7 223 aaKnown RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 NPAS2Q99743 824 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 TACO1Q9BSH4 297 aaKnown RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.33
PCDHGC3-205ENST00000617641 PSMD12O00232 456 aaPredicted RBP17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 MTX2O75431 263 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 GNAZP19086 355 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 AKT1P31749 480 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 CCR7P32248 378 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 ACTR3P61158 418 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 RALGDSQ12967 914 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 GPRIN3Q6ZVF9 776 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 HPS6Q86YV9 775 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 KIAA1958Q8N8K9 716 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR52B6Q8NGF0 335 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 LATS2Q9NRM7 1088 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 KCTD5Q9NXV2 234 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 CCDC167Q9P0B6 97 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 POLG2Q9UHN1 485 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 PACSIN3Q9UKS6 424 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 OARD1Q9Y530 152 aa17.08■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR4F21O95013 312 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 HLA-EP13747 358 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 METAP1P53582 386 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZRSR2Q15696 482 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 TTLL9Q3SXZ7 439 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 PPP2R2DQ66LE6 453 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 PARS2Q7L3T8 475 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 PDPRQ8NCN5 879 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 DTX3LQ8TDB6 740 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 TUBGCP3Q96CW5 907 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 CDK15Q96Q40 435 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 EBF2Q9HAK2 575 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 DEC1Q9P2X7 70 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 DKK3Q9UBP4 350 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 SARDHQ9UL12 918 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 ITM2BQ9Y287 266 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR56A5P0C7T3 313 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 ENO3P13929 434 aaPredicted RBP17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 PCBP2Q15366 365 aaKnown RBP eCLIP17.07■□□□□ 0.325e-7■■■■□ 25.7
PCDHGC3-205ENST00000617641 FNDC3BQ53EP0 1204 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 SCIMPQ6UWF3 145 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 GOLGA7Q7Z5G4 137 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 PHYKPLQ8IUZ5 450 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 FBXW8Q8N3Y1 598 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR9I1Q8NGQ6 314 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 LRIG1Q96JA1 1093 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZNF382Q96SR6 550 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 FAM83CQ9BQN1 747 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 NOL11Q9H8H0 719 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms