RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	UGT1A1	P22309	533 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	UGT1A4	P22310	534 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	UGT1A3	P35503	534 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	UGT1A5	P35504	534 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CSK	P41240	450 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	HTR6	P50406	440 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ARPC4	P59998	168 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CREB5	Q02930	508 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	BFSP2	Q13515	415 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CDH18	Q13634	790 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TXNDC8	Q6A555	127 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	PTRHD1	Q6GMV3	140 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	THOC7	Q6I9Y2	204 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	BLOC1S3	Q6QNY0	202 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	GPRIN3	Q6ZVF9	776 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	METTL6	Q8TCB7	284 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ELAC1	Q9H777	363 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	INTS7	Q9NVH2	962 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	GID8	Q9NWU2	228 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TUBA8	Q9NY65	449 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	EVL	Q9UI08	416 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	GPR45	Q9Y5Y3	372 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	NUP214	P35658	2090 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	C5orf42	Q9H799	3197 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	DOCK6	Q96HP0	2047 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	RNF103-CHMP3	A0A140T963	221 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	DHRS12	A0PJE2	317 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	FXYD1	O00168	92 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	PFDN6	O15212	129 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	B3GALNT1	O75752	331 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ESRRB	O95718	433 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	GDF5	P43026	501 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	PSMD8	P48556	350 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ATP4B	P51164	291 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ERVPABLB-1	P60509	514 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CTAG1A	P78358	180 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CYP51A1	Q16850	503 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TPGS1	Q6ZTW0	290 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	RALGPS2	Q86X27	583 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CBR4	Q8N4T8	237 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CIPC	Q9C0C6	399 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	RNF11	Q9Y3C5	154 aa		13.72	□□□□□ -0.21
CACNA1C-231	ENST00000616390	FFAR3	O14843	346 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	GPR42	O15529	346 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SMAD6	O43541	496 aa	Known RBP	13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SLC22A3	O75751	556 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CLIC3	O95833	236 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CAPN1	P07384	714 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	UROS	P10746	265 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	RPL5	P46777	297 aa	Known RBP	13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	C5orf22	Q49AR2	442 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SGO1	Q5FBB7	561 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	LETMD1	Q6P1Q0	360 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SLC2A7	Q6PXP3	512 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TMEM126B	Q8IUX1	230 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	APCDD1	Q8J025	514 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	OR56A4	Q8NGH8	313 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TCF12	Q99081	682 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	HOPX	Q9BPY8	73 aa	Predicted RBP	13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	GPATCH1	Q9BRR8	931 aa	Known RBP	13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TNKS2	Q9H2K2	1166 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TLR9	Q9NR96	1032 aa		13.71	□□□□□ -0.21
CACNA1C-231	ENST00000616390		A0A1B0GVG6	124 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	BBIP1	A8MTZ0	92 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	E2F3	O00716	465 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ARPC2	O15144	300 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CDH15	P55291	814 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SMARCB1	Q12824	385 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SLC8B1	Q6J4K2	584 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TRIML2	Q8N7C3	387 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PLD4	Q96BZ4	506 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	EGFL8	Q99944	293 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FEM1A	Q9BSK4	669 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DDX18	Q9NVP1	670 aa	Known RBP	13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VPS51	Q9UID3	782 aa		13.71	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ASPDH	A6ND91	283 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	COL6A1	P12109	1028 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	IL10	P22301	178 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PSMA4	P25789	261 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	IL12A	P29459	219 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HSPA13	P48723	471 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HSPA7	P48741	367 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	POLR2J	P52435	117 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZXDB	P98169	803 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MYLK3	Q32MK0	819 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ATP6AP1L	Q52LC2	224 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	NCEH1	Q6PIU2	408 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FAM126B	Q8IXS8	530 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PDZD8	Q8NEN9	1154 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DDI1	Q8WTU0	396 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TOP1MT	Q969P6	601 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PPM1M	Q96MI6	270 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	C17orf80	Q9BSJ5	609 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MRPL9	Q9BYD2	267 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ALG2	Q9H553	416 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms