RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PCSK7Q16549 785 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 PTRH1Q86Y79 214 aaKnown RBP18.63■□□□□ 0.57
CDX1-202ENST00000616154 TRIM48Q8IWZ4 208 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 SYCE1Q8N0S2 351 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 ESX1Q8N693 406 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 ACTL9Q8TC94 416 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 DTX3LQ8TDB6 740 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 UBE2Q2Q8WVN8 375 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 STARD8Q92502 1023 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 HAUS1Q96CS2 278 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 MRGPRX2Q96LB1 330 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 TRABDQ9H4I3 376 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 POT1Q9NUX5 634 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 KLHL8Q9P2G9 620 aaPredicted RBP18.63■□□□□ 0.57
CDX1-202ENST00000616154 SLC30A1Q9Y6M5 507 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 DOPEY2Q9Y3R5 2298 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 CYSRT1A8MQ03 144 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 PDZK1P1A8MUH7 402 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 PMPCBO75439 489 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 ZNF189O75820 626 aaPredicted RBP18.62■□□□□ 0.57
CDX1-202ENST00000616154 PYGMP11217 842 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 TYRP1P17643 537 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 OAS2P29728 719 aaKnown RBP18.62■□□□□ 0.57
CDX1-202ENST00000616154 NAP1L1P55209 391 aaKnown RBP18.62■□□□□ 0.57
CDX1-202ENST00000616154 OTUD4Q01804 1114 aaKnown RBP18.62■□□□□ 0.57
CDX1-202ENST00000616154 MPP3Q13368 585 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 AGAP9Q5VTM2 703 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 ABRAXAS1Q6UWZ7 409 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 ZNF547Q8IVP9 402 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 KLHDC8BQ8IXV7 354 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 TRIM58Q8NG06 486 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 C9orf43Q8TAL5 461 aaPredicted RBP18.62■□□□□ 0.57
CDX1-202ENST00000616154 VPS35Q96QK1 796 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 GBA3Q9H227 469 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 ZNF768Q9H5H4 540 aaKnown RBP18.62■□□□□ 0.57
CDX1-202ENST00000616154 DNAJC16Q9Y2G8 782 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 SPO11Q9Y5K1 396 aa18.62■□□□□ 0.57
CDX1-202ENST00000616154 MTX2O75431 263 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 CDK14O94921 469 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 TJP3O95049 919 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 BRAFP15056 766 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 HLA-DPA1P20036 260 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 RBL1P28749 1068 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 HMGCLP35914 325 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 CETN2P41208 172 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 FOXM1Q08050 763 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 SEPT7Q16181 437 aaKnown RBP18.61■□□□□ 0.57
CDX1-202ENST00000616154 KHDC1Q4VXA5 237 aaKnown RBP18.61■□□□□ 0.57
CDX1-202ENST00000616154 CCDC70Q6NSX1 233 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 WASH2PQ6VEQ5 465 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 PID1Q7Z2X4 250 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 PEX26Q7Z412 305 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 CDKL3Q8IVW4 592 aaPredicted RBP18.61■□□□□ 0.57
CDX1-202ENST00000616154 APOBEC4Q8WW27 367 aaKnown RBP18.61■□□□□ 0.57
CDX1-202ENST00000616154 TGM7Q96PF1 710 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 GORASP1Q9BQQ3 440 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 ULBP3Q9BZM4 244 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 EPN3Q9H201 632 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 WASH6PQ9NQA3 447 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 UBP1Q9NZI7 540 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 AMFRQ9UKV5 643 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 TMPRSS11EQ9UL52 423 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 RPS6KL1Q9Y6S9 549 aa18.61■□□□□ 0.57
CDX1-202ENST00000616154 AURKAO14965 403 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 DDX3YO15523 660 aaKnown RBP18.6■□□□□ 0.57
CDX1-202ENST00000616154 RBP3P10745 1247 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 AMD1P17707 334 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 TCN2P20062 427 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 IDSP22304 550 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 CAPZBP47756 277 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 LEPRP48357 1165 aaKnown RBP18.6■□□□□ 0.57
CDX1-202ENST00000616154 KLF1Q13351 362 aaPredicted RBP18.6■□□□□ 0.57
CDX1-202ENST00000616154 IL11RAQ14626 422 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 SLC1A5Q15758 541 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 SKIDA1Q1XH10 827 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 PRSS42Q7Z5A4 293 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 C11orf96Q7Z7L8 435 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 RBM12BQ8IXT5 1001 aaKnown RBP18.6■□□□□ 0.57
CDX1-202ENST00000616154 TTC30BQ8N4P2 665 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 HES6Q96HZ4 224 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 SLC40A1Q9NP59 571 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 HACD3Q9P035 362 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 ANAPC2Q9UJX6 822 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 LRRK2Q5S007 2527 aa18.6■□□□□ 0.57
CDX1-202ENST00000616154 COL12A1Q99715 3063 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 H7C0C1 242 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 KIF5CO60282 957 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 ZNF28P17035 718 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 RPL10P27635 214 aaKnown RBP18.59■□□□□ 0.57
CDX1-202ENST00000616154 CASRP41180 1078 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 ATP5OP48047 213 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 SEPHS1P49903 392 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 EIF3EP60228 445 aaKnown RBP18.59■□□□□ 0.57
CDX1-202ENST00000616154 SH3BP2P78314 561 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 DEFB109BQ30KR1 87 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 ATP13A5Q4VNC0 1218 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 SIRPB2Q5JXA9 342 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 CCDC181Q5TID7 509 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 ITPRIPL1Q6GPH6 555 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 AADACL2Q6P093 401 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms