RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 BNIP1Q12981 228 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 XKR4Q5GH76 650 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ESRP1Q6NXG1 681 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 PAMR1Q6UXH9 720 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 AMIGO2Q86SJ2 522 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 OXR1Q8N573 874 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 GLIS2Q9BZE0 524 aaPredicted RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLCO1B3Q9NPD5 702 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 CFAP97Q9P2B7 532 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 R3HDM2Q9Y2K5 976 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 N6AMT1Q9Y5N5 214 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 MAFBQ9Y5Q3 323 aaPredicted RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 LRRC37A3O60309 1634 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 H0Y858 1186 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 H3BM21 787 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ESR1P03372 595 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 PRKAR2AP13861 404 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLC18A1P54219 525 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 CLCQ05315 142 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 IL18R1Q13478 541 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 DLG2Q15700 870 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 QSOX2Q6ZRP7 698 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 P2RY8Q86VZ1 359 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 KBTBD2Q8IY47 623 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 RBM15BQ8NDT2 890 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 FAM13CQ8NE31 585 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 IL31RAQ8NI17 732 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 CPT1BQ92523 772 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 TP53INP1Q96A56 240 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 C8orf48Q96LL4 319 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 NMUR2Q9GZQ4 415 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 RSPH9Q9H1X1 276 aaPredicted RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 ANKHQ9HCJ1 492 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 RAB23Q9ULC3 237 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLC27A5Q9Y2P5 690 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 REXO2Q9Y3B8 237 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 A0A1W2PPM1 405 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 FAM234BA2RU67 622 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 C1RP00736 705 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 SELPP16109 830 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 IDH3AP50213 366 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 MAPK12P53778 367 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 CMC1Q7Z7K0 106 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 SPPL2CQ8IUH8 684 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 LIX1Q8N485 282 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 GRPEL2Q8TAA5 225 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ACP6Q9NPH0 428 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 IGSF9Q9P2J2 1179 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 A0A1B0GVM2 712 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 TCAF2A6NFQ2 919 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ORC5O43913 435 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 TSPAN1O60635 241 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 FKTNO75072 461 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 POP4O95707 220 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 RLN1P04808 185 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 LSM3P62310 102 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 MPP1Q00013 466 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 PRKD1Q15139 912 aaPredicted RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 PLET1Q6UQ28 207 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLC24A5Q71RS6 500 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 STX12Q86Y82 276 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLITRK4Q8IW52 837 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 PACRGLQ8N7B6 248 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 C15orf40Q8WUR7 153 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 DNASE1L2Q92874 299 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 CAMK1GQ96NX5 476 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 HNRNPABQ99729 332 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 RNF208Q9H0X6 261 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLC35C2Q9NQQ7 365 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 COPS7AQ9UBW8 275 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 MRPS7Q9Y2R9 242 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 A0A0U1RQJ8 604 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 IRF6O14896 467 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 RSL1D1O76021 490 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 METTL18O95568 372 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ANGPTL1O95841 491 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 AGR2O95994 175 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 RPLP0P05388 317 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 C2P06681 752 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 S100A1P23297 94 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 DDX6P26196 483 aaKnown RBP eCLIP4.52□□□□□ -1.69
CHD9-221ENST00000615216 SCNN1AP37088 669 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 PSMD8P48556 350 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 DNASE1L1P49184 302 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 SLC5A3P53794 718 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 PPP3R1P63098 170 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 HERVK_113P63132 956 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 FOXM1Q08050 763 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 FUT2Q10981 343 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ITGA7Q13683 1181 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 QPCTQ16769 361 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 RUNDC3AQ59EK9 446 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 GALNT5Q7Z7M9 940 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ATAD1Q8NBU5 361 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 HPS1Q92902 700 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 PCDHB18PQ96TA0 734 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 ERVK-6Q9BXR3 956 aa4.52□□□□□ -1.69
CHD9-221ENST00000615216 YTHDF1Q9BYJ9 559 aaKnown RBP4.52□□□□□ -1.69
CHD9-221ENST00000615216 IFT46Q9NQC8 304 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms