RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 WRAP53Q9BUR4 548 aaKnown RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 RIOK2Q9BVS4 552 aaKnown RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 ILKAPQ9H0C8 392 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 RSPH9Q9H1X1 276 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 ABCG8Q9H221 673 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 C8orf33Q9H7E9 229 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 SARS2Q9NP81 518 aaKnown RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 ZDHHC4Q9NPG8 344 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 SPATS2LQ9NUQ6 558 aaKnown RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 ABCF3Q9NUQ8 709 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 KLHL42Q9P2K6 505 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 MARCOQ9UEW3 520 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 TMPRSS11EQ9UL52 423 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ITM2BQ9Y287 266 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 RAP2CQ9Y3L5 183 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 MYO10Q9HD67 2058 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 TICRRQ7Z2Z1 1910 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ANKRD12Q6UB98 2062 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 CKAP5Q14008 2032 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 NEMP2A6NFY4 417 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 C2CD4DB7Z1M9 353 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 BTN3A1O00481 513 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 NEMP1O14524 444 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 SYNCRIPO60506 623 aaKnown RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 MAGEC1O60732 1142 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 KERAO60938 352 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 OR56A5P0C7T3 313 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 MTHFD2P13995 350 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 ATP1B2P14415 290 aaPredicted RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 ALOX15P16050 662 aaPredicted RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 GM2AP17900 193 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 KCNA5P22460 613 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 DGKAP23743 735 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 WASP42768 502 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 PSMD8P48556 350 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 RGS4P49798 205 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 HK2P52789 917 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 AQP5P55064 265 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 SEC13P55735 322 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 B4GALNT1Q00973 533 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 SATB1Q01826 763 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 CREB5Q02930 508 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 SMAD4Q13485 552 aaKnown RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 TSNQ15631 228 aaKnown RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 LACTB2Q53H82 288 aaPredicted RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 ARL13AQ5H913 290 aaPredicted RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 SDE2Q6IQ49 451 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 TXNDC11Q6PKC3 985 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 ATG14Q6ZNE5 492 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 ZNF765Q7L2R6 523 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 NLRP8Q86W28 1048 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 CPNE9Q8IYJ1 553 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 SLC44A3Q8N4M1 653 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 CCNYL1Q8N7R7 359 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 DDHD1Q8NEL9 900 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 BTN2A2Q8WVV5 523 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 EZH1Q92800 747 aaPredicted RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 FUBP1Q96AE4 644 aaKnown RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 AP2M1Q96CW1 435 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 PHF21BQ96EK2 531 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 L3HYPDHQ96EM0 354 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 LINGO1Q96FE5 620 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 DTD2Q96FN9 168 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 DCUN1D1Q96GG9 259 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 VPS35Q96QK1 796 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 WWP1Q9H0M0 922 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 STN1Q9H668 368 aaKnown RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 KCNK12Q9HB15 430 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 EML4Q9HC35 981 aaKnown RBP8.79□□□□□ -1
CCDC47-207ENST00000612558 CYP4F12Q9HCS2 524 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 PNPOQ9NVS9 261 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 LIMD1Q9UGP4 676 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 HAO1Q9UJM8 370 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 RNF112Q9ULX5 631 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 TMCO1Q9UM00 188 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 PLXNA2O75051 1894 aa8.79□□□□□ -1
CCDC47-207ENST00000612558 UBXN8O00124 270 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 CDC7O00311 574 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PLK4O00444 970 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MBTPS2O43462 519 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 AP2A2O94973 939 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 CHRNGP07510 517 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 CBSLP0DN79 551 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ITGB6P18564 788 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 DRD1P21728 446 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 C5AR1P21730 350 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 NTSR1P30989 418 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 AKT1P31749 480 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 CBSP35520 551 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 P2RY2P41231 377 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 RPL14P50914 215 aaKnown RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 HERVK_113P63132 956 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GALNT1Q10472 559 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 CNTN1Q12860 1018 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 CST6Q15828 149 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 TTLL9Q3SXZ7 439 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 HSF5Q4G112 596 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms