RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 NDUFS4O43181 175 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 BCL10O95999 233 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 ABCB1P08183 1280 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 ITGA2P17301 1181 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 GJA1P17302 382 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 NR2F2P24468 414 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 AMPHP49418 695 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 SIRPAP78324 504 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF234Q14588 700 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF585BQ52M93 769 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF704Q6ZNC4 412 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 C16orf82Q7Z2V1 217 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 SATL1Q86VE3 508 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM219Q86XT9 240 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 KMT5CQ86Y97 462 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 C1orf52Q8N6N3 182 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 GPATCH11Q8N954 259 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 KCTD6Q8NC69 237 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 PTERQ96BW5 349 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 NAP1L5Q96NT1 182 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 PPIL3Q9H2H8 161 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 MMP27Q9H306 513 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 DENND2DQ9H6A0 471 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 C6orf106Q9H6K1 298 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 MDFICQ9P1T7 246 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 OR2W1Q9Y3N9 320 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 RPS6KL1Q9Y6S9 549 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 EME2A4GXA9 379 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 OR5K3A6NET4 321 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 MAGEB17A8MXT2 336 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 TMEM178BH3BS89 294 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 PLK4O00444 970 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNHIT1O43257 154 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 SNRPEP62304 92 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 EEF1A1P68104 462 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 PLIN5Q00G26 463 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 ZBTB17Q13105 803 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 GTF2H2Q13888 395 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 KEAP1Q14145 624 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 RASA2Q15283 850 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 IZUMO4Q1ZYL8 232 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 EEF1A1P5Q5VTE0 462 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 IRAK1BP1Q5VVH5 260 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 ADALQ6DHV7 355 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 GTF2H2CQ6P1K8 395 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 UNQ6126/PRO20091Q6UXV3 157 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 ASB18Q6ZVZ8 466 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 Q75L30 129 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 ARMC9Q7Z3E5 817 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 POGLUT1Q8NBL1 392 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 OR52I2Q8NH67 350 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 BBS10Q8TAM1 723 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 TBC1D16Q8TBP0 767 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 TMEM255BQ8WV15 326 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 LPGAT1Q92604 370 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 DGAT2Q96PD7 388 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 DUX5Q96PT3 197 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 NEURL2Q9BR09 285 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 SYT17Q9BSW7 474 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 CCDC106Q9BWC9 280 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 CSTL1Q9H114 145 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 TCP11L1Q9NUJ3 509 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 KLHL9Q9P2J3 617 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 POU2F3Q9UKI9 436 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 WBP11Q9Y2W2 641 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 PCDHAC2Q9Y5I4 1007 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 TRPV2Q9Y5S1 764 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 CGNL1Q0VF96 1302 aa4.15□□□□□ -1.75
SMCHD1-213ENST00000609587 IGHV4OR15-8A0A075B7B6 117 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 PLSCR5A0PG75 271 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 OR2M5A3KFT3 312 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 TCERG1O14776 1098 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 IPO8O15397 1037 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 BUD23O43709 281 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 LDB3O75112 727 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 PPP1R3DO95685 299 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 FAM106CPP0CH98 169 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 CDH1P12830 882 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 HLA-DOBP13765 273 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 IL15P40933 162 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 CAPZA2P47755 286 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 UBXN2AP68543 259 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 RUNX1T1Q06455 604 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 AIMP1Q12904 312 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 GAGE2BQ13066 116 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 GAGE2EQ4V326 116 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF628Q5EBL2 1059 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 C9orf57Q5W0N0 161 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 ALS2CLQ60I27 953 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF324BQ6AW86 544 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 PRSS57Q6UWY2 283 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 RAD9BQ6WBX8 426 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 PLEKHM3Q6ZWE6 761 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 RBM23Q86U06 439 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 FBXO39Q8N4B4 442 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 CCDC191Q8NCU4 936 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 PHF21AQ96BD5 680 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms