RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CASP9P55211 416 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PLK2Q9NYY3 685 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 TRPS1Q9UHF7 1281 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MEIS2O14770 477 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 ZZZ3Q8IYH5 903 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 LRRC20Q8TCA0 184 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MUC13Q9H3R2 512 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 GLYATL1P3A0A0U1RQE8 302 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 VGLL4Q14135 290 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 ZNF781Q8N8C0 355 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 TTC29Q8NA56 475 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 GBA3Q9H227 469 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 NAE1Q13564 534 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RUNDC3AQ59EK9 446 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RIOX2Q8IUF8 465 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PDPRQ8NCN5 879 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 SHC3Q92529 594 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 JSRP1Q96MG2 331 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 COQ10BQ9H8M1 238 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 DNAJC11Q9NVH1 559 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RASGRP1O95267 797 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 ECHS1P30084 290 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CCNHP51946 323 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 STRADAQ7RTN6 431 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PDE10AQ9Y233 779 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MRPS33Q9Y291 106 aaKnown RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PCDHGA10Q9Y5H3 936 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 NME6O75414 186 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RPIAP49247 311 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CREMQ03060 361 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 P2RY8Q86VZ1 359 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PRMT5O14744 637 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 ITGB1P05556 798 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 VEGFAP15692 232 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PEX2P28328 305 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 LAPTM4BQ86VI4 370 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 ZNF567Q8N184 647 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RAI2Q9Y5P3 530 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 COLEC10Q9Y6Z7 277 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MAPK12P53778 367 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 TSPAN5P62079 268 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ZACNQ401N2 412 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 LRRC55Q6ZSA7 311 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ZBTB2Q8N680 514 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 GPR21Q99679 349 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CXCL14O95715 111 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 C1RP00736 705 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 GABRR2P28476 465 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 SLC20A2Q08357 652 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CNTD1Q8N815 330 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 FAM156AQ8NDB6 213 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 LENG8Q96PV6 779 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 INTS10Q9NVR2 710 aaKnown RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 HOXB6P17509 224 aaKnown RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CD247P20963 164 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ZCCHC12Q6PEW1 402 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 FITM2Q8N6M3 262 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 TNFRSF25Q93038 417 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CCDC28BQ9BUN5 200 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 RIMKLBQ9ULI2 386 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ZSCAN5BA6NJL1 495 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 GATBO75879 557 aaKnown RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CSN2P05814 226 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 MYCLP1P12525 358 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 IFI30P13284 250 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 FUT4P22083 530 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 DDX6P26196 483 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■□□□ 13.3
USP6NL-205ENST00000609104 ZNF460Q14592 562 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 UFD1Q92890 307 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CSPG4P5Q96PW8 444 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ALKBH4Q9NXW9 302 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CDH4P55283 916 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 TLR1Q15399 786 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 FAM92BQ6ZTR7 304 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 HEXDCQ8WVB3 486 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 PTPRMP28827 1452 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 MYH1P12882 1939 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 E9PAM4 449 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ABLIM1O14639 778 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 MPZL2O60487 215 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ADGRG6Q86SQ4 1221 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 PMEPA1Q969W9 287 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 AGAP2Q99490 1192 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 ZNF510Q9Y2H8 683 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 AQP4P55087 323 aa12.94□□□□□ -0.34
USP6NL-205ENST00000609104 CLCQ05315 142 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms