RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 UCK1Q9HA47 277 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 LZTFL1Q9NQ48 299 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 WASH6PQ9NQA3 447 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 SMOXQ9NWM0 555 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 SCHIP1Q9P0W5 487 aaPredicted RBP18.87■□□□□ 0.61
CTSA-217ENST00000607482 ZNF624Q9P2J8 865 aaPredicted RBP18.87■□□□□ 0.61
CTSA-217ENST00000607482 ACSL6Q9UKU0 697 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 PSMD13Q9UNM6 376 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 R3HDM2Q9Y2K5 976 aaKnown RBP18.87■□□□□ 0.61
CTSA-217ENST00000607482 KCTD3Q9Y597 815 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 TPH1P17752 444 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 STIP1P31948 543 aaKnown RBP18.86■□□□□ 0.61
CTSA-217ENST00000607482 SLC19A1P41440 591 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 GSE1Q14687 1217 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 ZRANB3Q5FWF4 1079 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 ZNF449Q6P9G9 518 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 KLHL35Q6PF15 583 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 TAS2R42Q7RTR8 314 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 LINC00523Q86TU6 105 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 IL22RA1Q8N6P7 574 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 CCDC89Q8N998 374 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 DNAAF3Q8N9W5 541 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 OR13C4Q8NGS5 318 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 HEXDCQ8WVB3 486 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 DDA1Q9BW61 102 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 FRMD8P1Q9BZ68 369 aaPredicted RBP18.86■□□□□ 0.61
CTSA-217ENST00000607482 FAM96AQ9H5X1 160 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 IMP3Q9NV31 184 aaKnown RBP18.86■□□□□ 0.61
CTSA-217ENST00000607482 OCIAD1Q9NX40 245 aa18.86■□□□□ 0.61
CTSA-217ENST00000607482 BPTFQ12830 3046 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 TCRBV7S2A1N4TA0A589 114 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 KLHL33A6NCF5 533 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 B4E171 279 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 ERVH48-1M5A8F1 160 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 ATXN7O15265 892 aaPredicted RBP18.85■□□□□ 0.61
CTSA-217ENST00000607482 METTL18O95568 372 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 SLC35G4P0C7Q5 338 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 TSPAN7P41732 249 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 CTSCP53634 463 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 KLF1Q13351 362 aaPredicted RBP18.85■□□□□ 0.61
CTSA-217ENST00000607482 SNX1Q13596 522 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 NFE2L1Q14494 772 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 POU6F1Q14863 301 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 PPP1R21Q6ZMI0 780 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 SNX20Q7Z614 316 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 ATG4AQ8WYN0 398 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 ZDHHC12Q96GR4 267 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 TEFMQ96QE5 360 aaKnown RBP18.85■□□□□ 0.61
CTSA-217ENST00000607482 COPS8Q99627 209 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 VPS37BQ9H9H4 285 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 SLC40A1Q9NP59 571 aa18.85■□□□□ 0.61
CTSA-217ENST00000607482 K7ENP7 123 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 TK2O00142 265 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 MC4RP32245 332 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 FOXM1Q08050 763 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 GPR18Q14330 331 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 CLCA4Q14CN2 919 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 GPR33Q49SQ1 333 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 ANKS6Q68DC2 871 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 IRGCQ6NXR0 463 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 INO80CQ6PI98 192 aaPredicted RBP18.84■□□□□ 0.61
CTSA-217ENST00000607482 CEACAM20Q6UY09 585 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 C11orf96Q7Z7L8 435 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 VASH2Q86V25 355 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 CFAP206Q8IYR0 622 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 SLC35B2Q8TB61 432 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 BBC3Q96PG8 261 aaPredicted RBP18.84■□□□□ 0.61
CTSA-217ENST00000607482 CTRCQ99895 268 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 ARNT2Q9HBZ2 717 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 PIH1D1Q9NWS0 290 aaKnown RBP18.84■□□□□ 0.61
CTSA-217ENST00000607482 PDP2Q9P2J9 529 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 ACSL5Q9ULC5 683 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 WDR37Q9Y2I8 494 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 PCDHGA3Q9Y5H0 932 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 B3GALT1Q9Y5Z6 326 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 PTPRQQ9UMZ3 2332 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 IGSF10Q6WRI0 2623 aa18.84■□□□□ 0.61
CTSA-217ENST00000607482 LOC400499M0QZD8 3231 aa18.83■□□□□ 0.61
CTSA-217ENST00000607482 MGAT4DA6NG13 374 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 CCL22O00626 93 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 GAPDHSO14556 408 aaPredicted RBP18.83■□□□□ 0.6
CTSA-217ENST00000607482 POLR1CO15160 346 aaPredicted RBP18.83■□□□□ 0.6
CTSA-217ENST00000607482 CAPN5O15484 640 aaPredicted RBP18.83■□□□□ 0.6
CTSA-217ENST00000607482 AP2A1O95782 977 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 POLBP06746 335 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 BRAFP15056 766 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 ARL4DP49703 201 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 SEPHS1P49903 392 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 ZNF140P52738 457 aaPredicted RBP18.83■□□□□ 0.6
CTSA-217ENST00000607482 GDF10P55107 478 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 DMPKQ09013 629 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 RPE65Q16518 533 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 KIAA1614Q5VZ46 1190 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 ARMC6Q6NXE6 501 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 GSTA5Q7RTV2 222 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 SLC13A5Q86YT5 568 aaPredicted RBP18.83■□□□□ 0.6
CTSA-217ENST00000607482 NXPE1Q8N323 547 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 LSM14AQ8ND56 463 aaKnown RBP18.83■□□□□ 0.6
CTSA-217ENST00000607482 C1orf54Q8WWF1 131 aa18.83■□□□□ 0.6
CTSA-217ENST00000607482 DNAJC1Q96KC8 554 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms