RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 BTBD1Q9H0C5 482 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 THAP1Q9NVV9 213 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 RNF112Q9ULX5 631 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 LRRC72A6NJI9 287 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 OR2AG2A6NM03 316 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 BTN3A1O00481 513 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 DLX3O60479 287 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 KERAO60938 352 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 TPBGLP0DKB5 382 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 TEAD1P28347 426 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 TRIM67Q6ZTA4 783 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 PLA2G15Q8NCC3 412 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 ZNF514Q96K75 400 aaPredicted RBP17.73■□□□□ 0.43
VRK3-225ENST00000601912 LENG8Q96PV6 779 aaPredicted RBP17.73■□□□□ 0.43
VRK3-225ENST00000601912 SGK2Q9HBY8 427 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 ITM2CQ9NQX7 267 aa17.73■□□□□ 0.43
VRK3-225ENST00000601912 EIF3FO00303 357 aaPredicted RBP17.72■□□□□ 0.43
VRK3-225ENST00000601912 STK25O00506 426 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 VEGFDO43915 354 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 ENO3P13929 434 aaPredicted RBP17.72■□□□□ 0.43
VRK3-225ENST00000601912 AOAHP28039 575 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 CCR7P32248 378 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 PRLHRP49683 370 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 OR4D1Q15615 310 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 PLEKHS1Q5SXH7 462 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 TMEM220Q6QAJ8 160 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 HEATR4Q86WZ0 1026 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 TSTD1Q8NFU3 115 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 ASB12Q8WXK4 309 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 KLK6Q92876 244 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 C7orf26Q96N11 449 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 ELAC2Q9BQ52 826 aaKnown RBP17.72■□□□□ 0.43
VRK3-225ENST00000601912 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 OR2AG1Q9H205 316 aa17.72■□□□□ 0.43
VRK3-225ENST00000601912 NPEPPSL1A6NEC2 478 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 CDC7O00311 574 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 SGTAO43765 313 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 IPO13O94829 963 aaKnown RBP17.71■□□□□ 0.43
VRK3-225ENST00000601912 KCNC1P48547 511 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 SLC1A6P48664 564 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 DNAJB13P59910 316 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 CDK3Q00526 305 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 FZD5Q13467 585 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 FGL2Q14314 439 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 IRF4Q15306 451 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 TSNQ15631 228 aaKnown RBP17.71■□□□□ 0.43
VRK3-225ENST00000601912 ACSBG2Q5FVE4 666 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 ADGRG6Q86SQ4 1221 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 ADAMTSL2Q86TH1 951 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 TRIM74Q86UV6 250 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 TP53I13Q8NBR0 393 aaPredicted RBP17.71■□□□□ 0.43
VRK3-225ENST00000601912 OR2T34Q8NGX1 318 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 PPP4R1Q8TF05 950 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 ASZ1Q8WWH4 475 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 ELMO1Q92556 727 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 COX14Q96I36 57 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 ATOH8Q96SQ7 321 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 CCM2Q9BSQ5 444 aa17.71■□□□□ 0.43
VRK3-225ENST00000601912 USP36Q9P275 1121 aaKnown RBP17.71■□□□□ 0.43
VRK3-225ENST00000601912 MBD1Q9UIS9 605 aaPredicted RBP17.71■□□□□ 0.43
VRK3-225ENST00000601912 TMEM114B3SHH9 223 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 SNNO75324 88 aaPredicted RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 MAT2AP31153 395 aaKnown RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 ACSL1P33121 698 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 CTSCP53634 463 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 HSPA14Q0VDF9 509 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 BOP1Q14137 746 aaKnown RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 INPP5AQ14642 412 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 BCL7AQ4VC05 210 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 ANO7Q6IWH7 933 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 PIWIL4Q7Z3Z4 852 aaKnown RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 RAB44Q7Z6P3 723 aaPredicted RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 CRLF3Q8IUI8 442 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 OR6Y1Q8NGX8 325 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 EXT2Q93063 718 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 FUBP1Q96AE4 644 aaKnown RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 WDR26Q9H7D7 661 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 TBC1D17Q9HA65 648 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 MBNL1Q9NR56 388 aaKnown RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 PHPT1Q9NRX4 125 aaPredicted RBP17.71■□□□□ 0.42
VRK3-225ENST00000601912 NCKIPSDQ9NZQ3 722 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 ATXN10Q9UBB4 475 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 TMCO1Q9UM00 188 aa17.71■□□□□ 0.42
VRK3-225ENST00000601912 A8MT66 165 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 SUPT3HB4E1H0 165 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 SUPT3HO75486 399 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 TROVE2P10155 538 aaKnown RBP eCLIP17.7■□□□□ 0.42
VRK3-225ENST00000601912 TRIM23P36406 574 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 NAGLUP54802 743 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 ABCE1P61221 599 aaKnown RBP17.7■□□□□ 0.42
VRK3-225ENST00000601912 NFKB2Q00653 900 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 OCRLQ01968 901 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 CFAP157Q5JU67 520 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 NAPRTQ6XQN6 538 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 FRA10AC1Q70Z53 315 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 PIGWQ7Z7B1 504 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 TRIM69Q86WT6 500 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 GPSM1Q86YR5 675 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 TRAPPC5Q8IUR0 188 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 BEND7Q8N7W2 519 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms