RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RAB33BQ9H082 229 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 PIH1D1Q9NWS0 290 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 TRMT1Q9NXH9 659 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 SMARCAL1Q9NZC9 954 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 OGFRQ9NZT2 677 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 SLC2A6Q9UGQ3 507 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 SNRNP200O75643 2136 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 CCDC187A0A096LP49 1063 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 IGHV5-10-1A0A0J9YXX1 117 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 CCDC162PA2VCL2 907 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 MGAT4DA6NG13 374 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 OR2AG2A6NM03 316 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 HGSO14964 777 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ZNF185O15231 689 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 KIF5CO60282 957 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 PHF2O75151 1096 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM63AO94886 807 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 C9P02748 559 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ITGA2BP08514 1039 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 GSTM1P09488 218 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 THRAP10827 490 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 MLNP12872 115 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SLC2A4P14672 509 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TCP1P17987 556 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ITGALP20701 1170 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 MC4RP32245 332 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 EIF2S3P41091 472 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 PTGIRP43119 386 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 GABREP78334 506 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 GSTM4Q03013 218 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 CACNG1Q06432 222 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TRA2AQ13595 282 aaKnown RBP eCLIP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 LAMB3Q13751 1172 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ITIH4Q14624 930 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 DBN1Q16643 649 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SKIDA1Q1XH10 827 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ANKRD22Q5VYY1 191 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 CCDC137Q6PK04 289 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM220Q6QAJ8 160 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 C19orf48Q6RUI8 117 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 CRTC3Q6UUV7 619 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM26Q6ZUK4 368 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 NLRP9Q7RTR0 991 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SERPINA9Q86WD7 417 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TRAPPC5Q8IUR0 188 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 RBM12BQ8IXT5 1001 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 AGGF1Q8N302 714 aaeCLIP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 BMPERQ8N8U9 685 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 Q8N9G6 341 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 WDR36Q8NI36 951 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 HEXDCQ8WVB3 486 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 HNRNPLLQ8WVV9 542 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ZFPM2Q8WW38 1151 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 MAGOHBQ96A72 148 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM159Q96B96 161 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 LRRC45Q96CN5 670 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SGF29Q96ES7 293 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ZNF578Q96N58 590 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM74Q96NL1 305 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 INSM2Q96T92 566 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 DPYSL5Q9BPU6 564 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 NUDT22Q9BRQ3 303 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SPRY4Q9C004 299 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 IL22Q9GZX6 179 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 OR52A5Q9H2C5 316 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SEMA6CQ9H3T2 930 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 EPB41L1Q9H4G0 881 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SYNDIG1Q9H7V2 258 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 MRM3Q9HC36 420 aaKnown RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 EPHA6Q9UF33 1036 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ACSL5Q9ULC5 683 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 ATXN7L1Q9ULK2 861 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SATB2Q9UPW6 733 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 PCDHGA7Q9Y5G6 932 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SLC30A1Q9Y6M5 507 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 SEC16AO15027 2179 aa8.62□□□□□ -1.03
SSBP4-208ENST00000600628 OR51F1A6NGY5 319 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 OR52A4PA6NMU1 304 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 AP3B1O00203 1094 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 PLD2O14939 933 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 AP2A2O94973 939 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 ANKRD34CP0C6C1 535 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 IDSP22304 550 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 MSNP26038 577 aaKnown RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 ARCN1P48444 511 aaKnown RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 NPY2RP49146 381 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 INHBCP55103 352 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 CCDC173Q0VFZ6 552 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 NFE2L1Q14494 772 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 C16orf72Q14CZ0 275 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 RPE65Q16518 533 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 KCTD19Q17RG1 926 aaPredicted RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 INSCQ1MX18 579 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 COL28A1Q2UY09 1125 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 C3orf38Q5JPI3 329 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 PCID2Q5JVF3 399 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 FNBP1LQ5T0N5 605 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms