RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ZNF473Q8WTR7 871 aaKnown RBP12.59□□□□□ -0.39
ZNF548-210ENST00000600442 ASZ1Q8WWH4 475 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 SCAMP4Q969E2 229 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 KIAA1191Q96A73 305 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 LINGO1Q96FE5 620 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 LATS2Q9NRM7 1088 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 IGSF5Q9NSI5 407 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 SPATA6Q9NWH7 488 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-210ENST00000600442 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 CPSF2Q9P2I0 782 aaKnown RBP12.59□□□□□ -0.39
ZNF548-210ENST00000600442 XPR1Q9UBH6 696 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 ITM2BQ9Y287 266 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 MTF2Q9Y483 593 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-210ENST00000600442 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 RALGAPA1Q6GYQ0 2036 aa12.59□□□□□ -0.39
ZNF548-210ENST00000600442 TBC1D3DA0A087WVF3 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3IA0A087WXS9 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3EA0A087X179 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3KA0A087X1G2 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TCRBV21S2A2A0A5A6 115 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3FA6NER0 549 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 IGLON5A6NGN9 336 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 CHURC1-FNTBB4DL54 471 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3LB9A6J9 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 EBAG9O00559 213 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 PLRG1O43660 514 aaKnown RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 ADAM23O75077 832 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 NIPSNAP2O75323 286 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TGDSO95455 350 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 DRD4P21917 467 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 KCNA4P22459 653 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TEAD1P28347 426 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 DRD3P35462 400 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 CLCN7P51798 805 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 COPAP53621 1224 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 DNAJB13P59910 316 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 ZNF528Q3MIS6 628 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 CTSL3PQ5NE16 218 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 PLEKHS1Q5SXH7 462 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3GQ6DHY5 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3CQ6IPX1 549 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 KIAA1211LQ6NV74 962 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 GPSM1Q86YR5 675 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 C10orf107Q8IVU9 208 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 WDR75Q8IWA0 830 aaKnown RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TBC1D3Q8IZP1 549 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 PLD6Q8N2A8 252 aaKnown RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 SIDT2Q8NBJ9 832 aaKnown RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 CCDC197Q8NCU1 140 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 ASB12Q8WXK4 309 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 EZH1Q92800 747 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 HIC2Q96JB3 615 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 ALG9Q9H6U8 611 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 SGK2Q9HBY8 427 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 TRIM39Q9HCM9 518 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 PHPT1Q9NRX4 125 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-210ENST00000600442 FGFR1OP2Q9NVK5 253 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 KLHL14Q9P2G3 628 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 EMCNQ9ULC0 261 aa12.58□□□□□ -0.4
ZNF548-210ENST00000600442 FAM170BA6NMN3 283 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 SLCO1B7G3V0H7 640 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 BTN3A1O00481 513 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 RAD51BO15315 384 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 LAMTOR5O43504 91 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 EDF1O60869 148 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 KERAO60938 352 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 IPO13O94829 963 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CDK14O94921 469 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 HSPA4LO95757 839 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 HIST1H2AGP0C0S8 130 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 GFAPP14136 432 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CD1DP15813 335 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 HIST1H2ADP20671 130 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 NUDT1P36639 197 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 SLC1A6P48664 564 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CSTF1Q05048 431 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 TMEM115Q12893 351 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 UBXN2BQ14CS0 331 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 TECRLQ5HYJ1 363 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 PNCKQ6P2M8 343 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 SYT13Q7L8C5 426 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 SPATA21Q7Z572 469 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 HORMAD1Q86X24 394 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CACUL1Q86Y37 369 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CD200R1Q8TD46 325 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 SKA2Q8WVK7 121 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 HIST1H2AHQ96KK5 128 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CNDP1Q96KN2 507 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 MRGPRX1Q96LB2 322 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 FOPNLQ96NB1 174 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms