RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NUP214P35658 2090 aaPredicted RBP11.39□□□□□ -0.59
ARHGEF1-220ENST00000600274 NRG2O14511 850 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 RFPL2O75678 378 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CLIC3O95833 236 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CHN2P52757 468 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 MTPNP58546 118 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ERVPABLB-1P60509 514 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 GAREM2Q75VX8 874 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CACUL1Q86Y37 369 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 OR2T11Q8NH01 316 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CCT7Q99832 543 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 FARSBQ9NSD9 589 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 PCTPQ9UKL6 214 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ASB3Q9Y575 518 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 PABPN1LA6NDY0 278 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 UPK3BL1B0FP48 263 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 UPK3BL2E5RIL1 263 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ACOT8O14734 319 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 C8AP07357 584 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 NFKBIAP25963 317 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ACVR1Q04771 509 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 PPP1R8Q12972 351 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC14A2Q15849 920 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 PHKG1Q16816 387 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 OTUD3Q5T2D3 398 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZFP1Q6P2D0 407 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 OR4F6Q8NGB9 312 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 GPR150Q8NGU9 434 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CYGBQ8WWM9 190 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TADA1Q96BN2 335 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 NR1H4Q96RI1 486 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC29A1Q99808 456 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 UBAP1Q9NZ09 502 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 IL17CQ9P0M4 197 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 MAP10Q9P2G4 905 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZNF225Q9UK10 706 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TBC1D30Q9Y2I9 924 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 KNL1Q8NG31 2342 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 GLYATL1P3A0A0U1RQE8 302 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC22A3O75751 556 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CXCL14O95715 111 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ADSLP30566 484 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 PTGR1Q14914 329 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ARHGEF6Q15052 776 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 AP5B1Q2VPB7 878 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZNF648Q5T619 568 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 PLPP4Q5VZY2 271 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 Q6ZVU0 165 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CHSY3Q70JA7 882 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TTC30BQ8N4P2 665 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 ING5Q8WYH8 240 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 KCTD14Q9BQ13 255 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 FAM192AQ9GZU8 254 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 IL26Q9NPH9 171 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 RIMS3Q9UJD0 308 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 CNOT6Q9ULM6 557 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 VPS9D1Q9Y2B5 631 aa11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 TDRKHQ9Y2W6 561 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 HEMK1Q9Y5R4 338 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-220ENST00000600274 FFAR2O15552 330 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 TGM5O43548 720 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 FOXD2O60548 495 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 F11P03951 625 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 DNAJB1P25685 340 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 PTGER3P43115 390 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 RGS4P49798 205 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 CACNG1Q06432 222 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 OGFRL1Q5TC84 451 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC39A5Q6ZMH5 540 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 RHEBL1Q8TAI7 183 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 LRRC58Q96CX6 371 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 VPS50Q96JG6 964 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 SOX17Q9H6I2 414 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 GID8Q9NWU2 228 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 KANSL1LA0AUZ9 987 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 LRATO95237 230 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 PGLSO95336 258 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 ESRRBO95718 433 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 G6PDP11413 515 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 RFTN1Q14699 578 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 GSTA3Q16772 222 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 DGKKQ5KSL6 1271 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 KANK2Q63ZY3 851 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 UTS2BQ765I0 119 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC15A3Q8IY34 581 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 OR10Q1Q8NGQ4 319 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 CYB5D2Q8WUJ1 264 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 TCF12Q99081 682 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 THUMPD3Q9BV44 507 aaKnown RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 NPIPB15A6NHN6 443 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms