RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 DEF6Q9H4E7 631 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.39□□□□□ -0.11
IRF3-223ENST00000599223 SPTBP11277 2137 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 LOC285095A0A1B0GVY8 99 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 BUD23O43709 281 aaKnown RBP14.38□□□□□ -0.11
IRF3-223ENST00000599223 AKR1B10O60218 316 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 PDGFAP04085 211 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 NELFEP18615 380 aaKnown RBP14.38□□□□□ -0.11
IRF3-223ENST00000599223 IDSP22304 550 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 HMGCLP35914 325 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 MC1RQ01726 317 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 TMEM115Q12893 351 aaPredicted RBP14.38□□□□□ -0.11
IRF3-223ENST00000599223 NFE2L1Q14494 772 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 IL11RAQ14626 422 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 PTPRCAPQ14761 206 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 CHRNA6Q15825 494 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 LRRC38Q5VT99 294 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 DUS1LQ6P1R4 473 aaKnown RBP14.38□□□□□ -0.11
IRF3-223ENST00000599223 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 LRRC8AQ8IWT6 810 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 SLC25A41Q8N5S1 370 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 OR8K1Q8NGG5 319 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 GDAP1Q8TB36 358 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 CT55Q8WUE5 264 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 MRGPRX2Q96LB1 330 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 AKIRIN1Q9H9L7 192 aaPredicted RBP14.38□□□□□ -0.11
IRF3-223ENST00000599223 ABHD10Q9NUJ1 306 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 ANKMY1Q9P2S6 941 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 EPHA6Q9UF33 1036 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 PSMD13Q9UNM6 376 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 KCTD3Q9Y597 815 aa14.38□□□□□ -0.11
IRF3-223ENST00000599223 OR2AG2A6NM03 316 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 AKR1B15C9JRZ8 316 aaPredicted RBP14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A9O60656 530 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 MFAP3LO75121 409 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 SPAG6O75602 509 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 DNAJB5O75953 348 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 FOLR1P15328 257 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 ZFXP17010 805 aaPredicted RBP14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A6P19224 532 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 COMTP21964 271 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A1P22309 533 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A4P22310 534 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 FECHP22830 423 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 PBLDP30039 288 aaPredicted RBP14.37□□□□□ -0.11
IRF3-223ENST00000599223 ARHGAP25P42331 645 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 MARCKSL1P49006 195 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 DMPKQ09013 629 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 TUBB3Q13509 450 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 DNASE1L3Q13609 305 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 RPE65Q16518 533 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 GPRC6AQ5T6X5 926 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 PWWP2BQ6NUJ5 590 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 HAUS1Q96CS2 278 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 SLC41A2Q96JW4 573 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 GORASP1Q9BQQ3 440 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 MAK16Q9BXY0 300 aaKnown RBP14.37□□□□□ -0.11
IRF3-223ENST00000599223 RAB33BQ9H082 229 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A7Q9HAW7 530 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A10Q9HAW8 530 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 UGT1A8Q9HAW9 530 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 IL17CQ9P0M4 197 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 SEMA5BQ9P283 1151 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 FAM153AQ9UHL3 310 aa14.37□□□□□ -0.11
IRF3-223ENST00000599223 CFAP20Q9Y6A4 193 aaKnown RBP14.37□□□□□ -0.11
IRF3-223ENST00000599223 SPTBN1Q01082 2364 aaKnown RBP14.37□□□□□ -0.11
IRF3-223ENST00000599223 PCSK5Q92824 1860 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 CDC14CA4D256 554 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 CST8O60676 142 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 KATNA1O75449 491 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 POP7O75817 140 aaKnown RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 EBLN1P0CF75 366 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 SPAM1P38567 509 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 PMS2P54278 862 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 RPS18P62269 152 aaKnown RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 LAMB3Q13751 1172 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 GTF2H3Q13889 308 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 UBAP2LQ14157 1087 aaKnown RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.36□□□□□ -0.11
IRF3-223ENST00000599223 KAZNQ674X7 775 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 SPOCD1Q6ZMY3 1216 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 AMZ2Q86W34 360 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 PPP1R3BQ86XI6 285 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 RHOT1Q8IXI2 618 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 RBM12BQ8IXT5 1001 aaKnown RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 ZNF567Q8N184 647 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 BEND7Q8N7W2 519 aaPredicted RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 IPMKQ8NFU5 416 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 BLOC1S5Q8TDH9 187 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 MIB2Q96AX9 1013 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 ZDHHC12Q96GR4 267 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 MAP3K3Q99759 626 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 TRIM55Q9BYV6 548 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 ACTL8Q9H568 366 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 NHEJ1Q9H9Q4 299 aaPredicted RBP14.36□□□□□ -0.11
IRF3-223ENST00000599223 LHX9Q9NQ69 397 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms