RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KLHL33A6NCF5 533 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 MGAT4DA6NG13 374 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 ZNF185O15231 689 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 RALBP11234 206 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 ATP1B2P14415 290 aaPredicted RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 HOXB3P14651 431 aaPredicted RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 CSF2RBP32927 897 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 CDK16Q00536 496 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 NFE2L1Q14494 772 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 CLCA4Q14CN2 919 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 SEPT7Q16181 437 aaKnown RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 TBC1D25Q3MII6 688 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 NKAIN2Q5VXU1 208 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 METRNLQ641Q3 311 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 XKR5Q6UX68 686 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 OR2L2Q8NH16 312 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 SNIP1Q8TAD8 396 aaKnown RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 NAT14Q8WUY8 206 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 PEX13Q92968 403 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 DCUN1D1Q96GG9 259 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 ZNF778Q96MU6 729 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 ZNF578Q96N58 590 aaPredicted RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 SLC46A1Q96NT5 459 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.7■□□□□ 0.9
PNKP-209ENST00000596726 SLC2A6Q9UGQ3 507 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 NEU2Q9Y3R4 380 aa20.7■□□□□ 0.9
PNKP-209ENST00000596726 TCRBV7S3A2A0A539 114 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 CCDC162PA2VCL2 907 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 CFAP99D6REC4 459 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 KRT14P02533 472 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 TCP1P17987 556 aaKnown RBP20.69■□□□□ 0.9
PNKP-209ENST00000596726 FOXN2P32314 431 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 MAGEA6P43360 314 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 PRLHRP49683 370 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 LIMK2P53671 638 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 EPHA4P54764 986 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 DRG2P55039 364 aaKnown RBP20.69■□□□□ 0.9
PNKP-209ENST00000596726 ERVPABLB-1P60509 514 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 TRIP13Q15645 432 aaPredicted RBP20.69■□□□□ 0.9
PNKP-209ENST00000596726 CCDC137Q6PK04 289 aaKnown RBP20.69■□□□□ 0.9
PNKP-209ENST00000596726 RAB11FIP2Q7L804 512 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 NLRP9Q7RTR0 991 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 OR4D9Q8NGE8 314 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 FGF11Q92914 225 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 DPYSL5Q9BPU6 564 aa20.69■□□□□ 0.9
PNKP-209ENST00000596726 PKD1L2Q7Z442 2459 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 IGHV5-10-1A0A0J9YXX1 117 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 OR51F1A6NGY5 319 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 LILRA5A6NI73 299 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 OR52A4PA6NMU1 304 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 AP3B1O00203 1094 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 PLD2O14939 933 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 PHF2O75151 1096 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 VIPP01282 170 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 PBLDP30039 288 aaPredicted RBP20.68■□□□□ 0.9
PNKP-209ENST00000596726 MLLT3P42568 568 aaPredicted RBP20.68■□□□□ 0.9
PNKP-209ENST00000596726 NPY2RP49146 381 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 KCNJ11Q14654 390 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 DBN1Q16643 649 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 PCID2Q5JVF3 399 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 PAPD7Q5XG87 772 aaKnown RBP20.68■□□□□ 0.9
PNKP-209ENST00000596726 TMEM71Q6P5X7 295 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 LRRC8BQ6P9F7 803 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 TMEM26Q6ZUK4 368 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 ZNF534Q76KX8 674 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 TAS2R42Q7RTR8 314 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 FBXO39Q8N4B4 442 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 OR10G6Q8NH81 332 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 HDAC10Q969S8 669 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 TMEM159Q96B96 161 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 SGSM3Q96HU1 749 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 TBC1D10AQ9BXI6 508 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 SLC40A1Q9NP59 571 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 POT1Q9NUX5 634 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 PDP2Q9P2J9 529 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 LAMA5O15230 3695 aa20.68■□□□□ 0.9
PNKP-209ENST00000596726 A0A087WV48 116 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 C17orf113A0A1B0GUU1 675 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 CDRT15L2A8MXV6 281 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 DUX1O43812 170 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 EIF2S3P41091 472 aaKnown RBP20.67■□□□□ 0.9
PNKP-209ENST00000596726 HALP42357 657 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 FNTAP49354 379 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 VPS41P49754 854 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 SESN2P58004 480 aaPredicted RBP20.67■□□□□ 0.9
PNKP-209ENST00000596726 GNG11P61952 73 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 CCDC173Q0VFZ6 552 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 GPS1Q13098 491 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 TRA2AQ13595 282 aaKnown RBP eCLIP20.67■□□□□ 0.9
PNKP-209ENST00000596726 ITIH4Q14624 930 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 PHF19Q5T6S3 580 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 WDR74Q6RFH5 385 aaPredicted RBP20.67■□□□□ 0.9
PNKP-209ENST00000596726 TRIM48Q8IWZ4 208 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 RBM12BQ8IXT5 1001 aaKnown RBP20.67■□□□□ 0.9
PNKP-209ENST00000596726 PPHLN1Q8NEY8 458 aaKnown RBP20.67■□□□□ 0.9
PNKP-209ENST00000596726 AHCYL2Q96HN2 611 aaKnown RBP20.67■□□□□ 0.9
PNKP-209ENST00000596726 IL22Q9GZX6 179 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 EPB41L1Q9H4G0 881 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 CHRAC1Q9NRG0 131 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 TMEM9Q9P0T7 183 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms