RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NR1I3Q14994 352 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 INPP5JQ15735 1006 aaPredicted RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 CHRNA6Q15825 494 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 PCSK7Q16549 785 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 ANO6Q4KMQ2 910 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 IZUMO3Q5VZ72 239 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 ALKBH5Q6P6C2 394 aaKnown RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 KLHL35Q6PF15 583 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 FAM83HQ6ZRV2 1179 aaPredicted RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 NT5DC3Q86UY8 548 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 SLC38A9Q8NBW4 561 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 SPATA22Q8NHS9 363 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 ZNF501Q96CX3 271 aaPredicted RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 ZNF830Q96NB3 372 aaPredicted RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 AGAP3Q96P47 875 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 OLFM3Q96PB7 478 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 XPO4Q9C0E2 1151 aaKnown RBP9.75□□□□□ -0.85
LIG1-209ENST00000596104 CHST8Q9H2A9 424 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 IL26Q9NPH9 171 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 ACSS2Q9NR19 701 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 PCDHGB7Q9Y5F8 929 aa9.75□□□□□ -0.85
LIG1-209ENST00000596104 DOPEY1Q5JWR5 2465 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 A0A1W2PQJ5 194 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 A1L4Q6 167 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 OR5K3A6NET4 321 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 ZNF487B1APH4 448 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 TCP11X1B4DZS4 312 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 GPR39O43194 453 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 SCRG1O75711 98 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 POP7O75817 140 aaKnown RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 MT-CYBP00156 380 aaPredicted RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 SERPING1P05155 500 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 CA5AP35218 305 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 HMGCLP35914 325 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 PBX1P40424 430 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 TUBB4BP68371 445 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 HSD11B2P80365 405 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 MRPL49Q13405 166 aaKnown RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 TUBB2AQ13885 445 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 GTF2H3Q13889 308 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 GPR19Q15760 415 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 DNTTIP2Q5QJE6 756 aaKnown RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 SLC6A19Q695T7 634 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 SLC9A4Q6AI14 798 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 LCN10Q6JVE6 187 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 JMJD6Q6NYC1 403 aaPredicted RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 AMZ2Q86W34 360 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 TTC30BQ8N4P2 665 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 RASGEF1AQ8N9B8 481 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 FDCSPQ8NFU4 85 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 DTX3LQ8TDB6 740 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 BRSK1Q8TDC3 778 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 MR1Q95460 341 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 LRFN5Q96NI6 719 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 SRPK1Q96SB4 655 aaKnown RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 TUBB2BQ9BVA1 445 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 NAT10Q9H0A0 1025 aaKnown RBP9.74□□□□□ -0.85
LIG1-209ENST00000596104 CBX8Q9HC52 389 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 BPIFA1Q9NP55 256 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 CASS4Q9NQ75 786 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 LATS2Q9NRM7 1088 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 KCND1Q9NSA2 647 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 LUZP4Q9P127 313 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 PSMD13Q9UNM6 376 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 ZNF451Q9Y4E5 1061 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 HEY1Q9Y5J3 304 aa9.74□□□□□ -0.85
LIG1-209ENST00000596104 SSU72P8A0A1W2PR75 194 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 WIPF3A6NGB9 483 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 C3orf70A6NLC5 250 aaPredicted RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 SMTNL1A8MU46 457 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 GAPDHSO14556 408 aaPredicted RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A9O60656 530 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 PMPCBO75439 489 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 DDAH2O95865 285 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 CAPN1P07384 714 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 RAB40ALP0C0E4 278 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 MTHFD1P11586 935 aaKnown RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A6P19224 532 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A1P22309 533 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A4P22310 534 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 RORAP35398 523 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 ARL4DP49703 201 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 PDE1BQ01064 536 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 AP1B1Q10567 949 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 NFE2L1Q14494 772 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 PLCL1Q15111 1095 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 PDK1Q15118 436 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 NOMO1Q15155 1222 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 EIF2S3LQ2VIR3 472 aaKnown RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 PLEKHS1Q5SXH7 462 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 PRAMEF17Q5VTA0 474 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 FAM69BQ5VUD6 431 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 METRNLQ641Q3 311 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 NPNTQ6UXI9 565 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 TMEM126BQ8IUX1 230 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 CARFQ8N187 725 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 RBMXL3Q8N7X1 1067 aaKnown RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 DDHD1Q8NEL9 900 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 OR8K5Q8NH50 307 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 GDAP1Q8TB36 358 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms