RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LOC285095A0A1B0GVY8 99 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 MT-ND3P03897 115 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 NTRK1P04629 796 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 EBLN1P0CF75 366 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 NFKB1P19838 968 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 CHRNA4P43681 627 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 DMPKQ09013 629 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 NFE2L1Q14494 772 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
LIG1-205ENST00000593425 CHRNA6Q15825 494 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 RPE65Q16518 533 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 FAM199XQ6PEV8 388 aaPredicted RBP16.01■□□□□ 0.15
LIG1-205ENST00000593425 FAM151BQ6UXP7 276 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 UBXN4Q92575 508 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 TTC25Q96NG3 672 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 PSMG3-AS1Q96PY0 264 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 SRPK1Q96SB4 655 aaKnown RBP16.01■□□□□ 0.15
LIG1-205ENST00000593425 PDE7BQ9NP56 450 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 SAE1Q9UBE0 346 aaPredicted RBP16.01■□□□□ 0.15
LIG1-205ENST00000593425 FLNCQ14315 2725 aa16.01■□□□□ 0.15
LIG1-205ENST00000593425 BLACEA4D250 179 aa16■□□□□ 0.15
LIG1-205ENST00000593425 OR2AG2A6NM03 316 aa16■□□□□ 0.15
LIG1-205ENST00000593425 C21orf140B9A014 251 aa16■□□□□ 0.15
LIG1-205ENST00000593425 F5H423 210 aaPredicted RBP16■□□□□ 0.15
LIG1-205ENST00000593425 BUD23O43709 281 aaKnown RBP16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A9O60656 530 aa16■□□□□ 0.15
LIG1-205ENST00000593425 POP7O75817 140 aaKnown RBP16■□□□□ 0.15
LIG1-205ENST00000593425 RECKO95980 971 aa16■□□□□ 0.15
LIG1-205ENST00000593425 PECAM1P16284 738 aaPredicted RBP16■□□□□ 0.15
LIG1-205ENST00000593425 ZFXP17010 805 aaPredicted RBP16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A6P19224 532 aa16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A1P22309 533 aa16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A4P22310 534 aa16■□□□□ 0.15
LIG1-205ENST00000593425 SPAM1P38567 509 aa16■□□□□ 0.15
LIG1-205ENST00000593425 UQCRFS1P47985 274 aa16■□□□□ 0.15
LIG1-205ENST00000593425 WNT3AP56704 352 aa16■□□□□ 0.15
LIG1-205ENST00000593425 WASHC5Q12768 1159 aa16■□□□□ 0.15
LIG1-205ENST00000593425 SEMA5AQ13591 1074 aa16■□□□□ 0.15
LIG1-205ENST00000593425 PLCL1Q15111 1095 aa16■□□□□ 0.15
LIG1-205ENST00000593425 SIRPB2Q5JXA9 342 aa16■□□□□ 0.15
LIG1-205ENST00000593425 CPZQ66K79 652 aa16■□□□□ 0.15
LIG1-205ENST00000593425 DUS1LQ6P1R4 473 aaKnown RBP16■□□□□ 0.15
LIG1-205ENST00000593425 CYB5D1Q6P9G0 228 aa16■□□□□ 0.15
LIG1-205ENST00000593425 MFSD7Q6UXD7 560 aa16■□□□□ 0.15
LIG1-205ENST00000593425 AMZ2Q86W34 360 aa16■□□□□ 0.15
LIG1-205ENST00000593425 ATCAYQ86WG3 371 aa16■□□□□ 0.15
LIG1-205ENST00000593425 APLFQ8IW19 511 aaPredicted RBP16■□□□□ 0.15
LIG1-205ENST00000593425 SLC25A41Q8N5S1 370 aa16■□□□□ 0.15
LIG1-205ENST00000593425 BRSK1Q8TDC3 778 aa16■□□□□ 0.15
LIG1-205ENST00000593425 XPO4Q9C0E2 1151 aaKnown RBP16■□□□□ 0.15
LIG1-205ENST00000593425 DEF6Q9H4E7 631 aa16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A7Q9HAW7 530 aa16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A10Q9HAW8 530 aa16■□□□□ 0.15
LIG1-205ENST00000593425 UGT1A8Q9HAW9 530 aa16■□□□□ 0.15
LIG1-205ENST00000593425 IL17CQ9P0M4 197 aa16■□□□□ 0.15
LIG1-205ENST00000593425 FAM153AQ9UHL3 310 aa16■□□□□ 0.15
LIG1-205ENST00000593425 HYOU1Q9Y4L1 999 aa16■□□□□ 0.15
LIG1-205ENST00000593425 CFAP20Q9Y6A4 193 aaKnown RBP16■□□□□ 0.15
LIG1-205ENST00000593425 GAPDHSO14556 408 aaPredicted RBP15.99■□□□□ 0.15
LIG1-205ENST00000593425 KCNJ13O60928 360 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 TNNT1P13805 278 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 PBLDP30039 288 aaPredicted RBP15.99■□□□□ 0.15
LIG1-205ENST00000593425 CHAF1BQ13112 559 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 LAMB3Q13751 1172 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 LLGL1Q15334 1064 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 TMEM220Q6QAJ8 160 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 BEND7Q8N7W2 519 aaPredicted RBP15.99■□□□□ 0.15
LIG1-205ENST00000593425 DDHD1Q8NEL9 900 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 DTX3LQ8TDB6 740 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 OXNAD1Q96HP4 312 aaPredicted RBP15.99■□□□□ 0.15
LIG1-205ENST00000593425 ZNF514Q96K75 400 aaPredicted RBP15.99■□□□□ 0.15
LIG1-205ENST00000593425 MRGPRX2Q96LB1 330 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 DNAJC7Q99615 494 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 TRABDQ9H4I3 376 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 FGF21Q9NSA1 209 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 SPTLC3Q9NUV7 552 aa15.99■□□□□ 0.15
LIG1-205ENST00000593425 IMP3Q9NV31 184 aaKnown RBP15.99■□□□□ 0.15
LIG1-205ENST00000593425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.99■□□□□ 0.153e-7■■□□□ 13.6
LIG1-205ENST00000593425 GLYATL1P3A0A0U1RQE8 302 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 SSU72P8A0A1W2PR75 194 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 OR5K3A6NET4 321 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 TLCD2A6NGC4 264 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 GOLGA6L19H0YKK7 550 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 AKR1B10O60218 316 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 MTHFD1P11586 935 aaKnown RBP15.98■□□□□ 0.15
LIG1-205ENST00000593425 PTPN4P29074 926 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 ARHGAP25P42331 645 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 CDKN2BP42772 138 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 ACY1Q03154 408 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 IL10RAQ13651 578 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 PTPRCAPQ14761 206 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 PPP2R5EQ16537 467 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 UGT8Q16880 541 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 DNTTIP2Q5QJE6 756 aaKnown RBP15.98■□□□□ 0.15
LIG1-205ENST00000593425 LDLRAP1Q5SW96 308 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 GPRC6AQ5T6X5 926 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 LRRC38Q5VT99 294 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 KLHL35Q6PF15 583 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 GLT6D1Q7Z4J2 308 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 BLOC1S5Q8TDH9 187 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms