RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 LOC400499M0QZD8 3231 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 EIF4E1BA6NMX2 242 aaKnown RBP13.62□□□□□ -0.23
APOC1-208ENST00000592535 CCL22O00626 93 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 ARHGAP6O43182 974 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 LDB2O43679 373 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 KRT86O43790 486 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 KCNJ13O60928 360 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 PRB1P04280 392 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 TYRP1P17643 537 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 TPH1P17752 444 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 CD82P27701 267 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 PBLDP30039 288 aaPredicted RBP13.62□□□□□ -0.23
APOC1-208ENST00000592535 GFERP55789 205 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 NFE2L1Q14494 772 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 LONRF2Q1L5Z9 754 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 FNBP1LQ5T0N5 605 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 SEL1L2Q5TEA6 688 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 KIAA1614Q5VZ46 1190 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 VASH2Q86V25 355 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 BMPERQ8N8U9 685 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 SLC39A7Q92504 469 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 LRRC45Q96CN5 670 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 CXorf40BQ96DE9 158 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 SGF29Q96ES7 293 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 PIH1D1Q9NWS0 290 aaKnown RBP13.62□□□□□ -0.23
APOC1-208ENST00000592535 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
APOC1-208ENST00000592535 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
APOC1-208ENST00000592535 DNMT3AQ9Y6K1 912 aaPredicted RBP13.62□□□□□ -0.23
APOC1-208ENST00000592535 PIKFYVEQ9Y2I7 2098 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 AGAP14A8MT82 685 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 B4E171 279 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.61□□□□□ -0.23
APOC1-208ENST00000592535 ERVH48-1M5A8F1 160 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 UBXN7O94888 489 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 C9P02748 559 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 AMD1P17707 334 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 TSPAN7P41732 249 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 HALP42357 657 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 PDE1BQ01064 536 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 RHDQ02161 417 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 COL9A2Q14055 689 aaPredicted RBP13.61□□□□□ -0.23
APOC1-208ENST00000592535 GPR18Q14330 331 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 P3H1Q32P28 736 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 SLC13A5Q86YT5 568 aaPredicted RBP13.61□□□□□ -0.23
APOC1-208ENST00000592535 PLXDC1Q8IUK5 500 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 GPR150Q8NGU9 434 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 JPH3Q8WXH2 748 aaPredicted RBP13.61□□□□□ -0.23
APOC1-208ENST00000592535 RSC1A1Q92681 617 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 DNAJC1Q96KC8 554 aaKnown RBP13.61□□□□□ -0.23
APOC1-208ENST00000592535 DDA1Q9BW61 102 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 FAM96AQ9H5X1 160 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 LRRC40Q9H9A6 602 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 SLC40A1Q9NP59 571 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 CRLS1Q9UJA2 301 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 PCDHB11Q9Y5F2 797 aa13.61□□□□□ -0.23
APOC1-208ENST00000592535 STMND1H3BQB6 276 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 SGTAO43765 313 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 LIASO43766 372 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 AP2A1O95782 977 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 ITGALP20701 1170 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 MC4RP32245 332 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 HADHAP40939 763 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 LEPRP48357 1165 aaKnown RBP13.6□□□□□ -0.23
APOC1-208ENST00000592535 CDKN1CP49918 316 aaPredicted RBP13.6□□□□□ -0.23
APOC1-208ENST00000592535 MC2RQ01718 297 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 SEPT6Q14141 434 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 GSE1Q14687 1217 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 OASLQ15646 514 aaKnown RBP13.6□□□□□ -0.23
APOC1-208ENST00000592535 RPE65Q16518 533 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 BCL7AQ4VC05 210 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 MANEAQ5SRI9 462 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 DCAF12Q5T6F0 453 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 MEI1Q5TIA1 1274 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 XKR5Q6UX68 686 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 SNX20Q7Z614 316 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
APOC1-208ENST00000592535 NXPE1Q8N323 547 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 TTC9Q92623 222 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 ULK4Q96C45 1275 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 RTP4Q96DX8 246 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 ZNF514Q96K75 400 aaPredicted RBP13.6□□□□□ -0.23
APOC1-208ENST00000592535 C9orf72Q96LT7 481 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 TGM7Q96PF1 710 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 CTRCQ99895 268 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 C19orf43Q9BQ61 176 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 LZTFL1Q9NQ48 299 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 FAM8A1Q9UBU6 413 aa13.6□□□□□ -0.23
APOC1-208ENST00000592535 MGAQ8IWI9 3026 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 MGAT4DA6NG13 374 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 TK2O00142 265 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 CAPN5O15484 640 aaPredicted RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 PSMD3O43242 534 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 ANKRD34CP0C6C1 535 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 PRSS56P0CW18 603 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 WT1P19544 449 aaPredicted RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 CAPZBP47756 277 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 RAB15P59190 212 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms