RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 UTP11Q9Y3A2 253 aaKnown RBP6.36□□□□□ -1.39
VPS4B-205ENST00000591383 OR1A2Q9Y585 309 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PCDHGA5Q9Y5G8 931 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 MAD1L1Q9Y6D9 718 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 PLXNB3Q9ULL4 1909 aa6.36□□□□□ -1.39
VPS4B-205ENST00000591383 GLYATL1P3A0A0U1RQE8 302 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 LNP1A1A4G5 178 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 HEATR9A2RTY3 570 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 POM121BA6NF01 834 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PRR5-ARHGAP8B1AHC4 643 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CACNB4O00305 520 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SCAMP1O15126 338 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 BANF1O75531 89 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SUN1O94901 812 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SEC31AO94979 1220 aaKnown RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 KCNH1O95259 989 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PRAMEF1O95521 474 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 EPOP01588 193 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CELA2BP08218 269 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 TSHRP16473 764 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CPEP16870 476 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 BPIP17213 487 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 LPOP22079 712 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 AKT1P31749 480 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 RABIFP47224 123 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SPINT3P49223 89 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ITGA8P53708 1063 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 DCDC1P59894 354 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 RAC1P63000 192 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CDK16Q00536 496 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PDE1BQ01064 536 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 IL9RQ01113 521 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PDE1CQ14123 709 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PTPRCAPQ14761 206 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 NFATC4Q14934 902 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 MORF4L2Q15014 288 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 TAF1AQ15573 450 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 DUOXA1Q1HG43 343 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 DNAJC21Q5F1R6 531 aaKnown RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 RNASEH2BQ5TBB1 312 aaKnown RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 GTF2IRD2BQ6EKJ0 949 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 DENND5AQ6IQ26 1287 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ESRP1Q6NXG1 681 aaKnown RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 RANBP10Q6VN20 620 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 Q6ZSR6 202 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 MICALCLQ6ZW33 695 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ZNF534Q76KX8 674 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ZNF765Q7L2R6 523 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 GTF2IRD2Q86UP8 949 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CCDC25Q86WR0 208 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PHYKPLQ8IUZ5 450 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SLC22A18ASQ8N1D0 253 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PELI3Q8N2H9 469 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 DCLK2Q8N568 766 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 TMEM145Q8NBT3 493 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CEP76Q8TAP6 659 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 GDAP1Q8TB36 358 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 DNASE2BQ8WZ79 361 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SKA1Q96BD8 255 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CFAP36Q96G28 342 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PDXPQ96GD0 296 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 SERPINB12Q96P63 405 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 LENG8Q96PV6 779 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ORAI3Q9BRQ5 295 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ABCG8Q9H221 673 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ARFGAP3Q9NP61 516 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PARD6AQ9NPB6 346 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 GDF3Q9NR23 364 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PHPT1Q9NRX4 125 aaPredicted RBP6.35□□□□□ -1.39
VPS4B-205ENST00000591383 BFARQ9NZS9 450 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 KLQ9UEF7 1012 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 ANAPC5Q9UJX4 755 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 PPIL1Q9Y3C6 166 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 NEU2Q9Y3R4 380 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 TCAF1Q9Y4C2 921 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 KCTD3Q9Y597 815 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 CEP250Q9BV73 2442 aa6.35□□□□□ -1.39
VPS4B-205ENST00000591383 A0A1W2PR77 199 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 OR51F1A6NGY5 319 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 FADS2P1A8MWK0 482 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 PROB1E7EW31 1015 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 TLR4O00206 839 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 TERTO14746 1132 aaKnown RBP6.34□□□□□ -1.39
VPS4B-205ENST00000591383 NDC80O14777 642 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 VILLO15195 856 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 LDB2O43679 373 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 OPA1O60313 960 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 MAGEC1O60732 1142 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 SDC3O75056 442 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 AVILO75366 819 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 KATNA1O75449 491 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 CER1O95813 267 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 WNT1P04628 370 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 SYPP08247 313 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 RHOXF2BP0C7M4 288 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 ENGP17813 658 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 ITGALP20701 1170 aa6.34□□□□□ -1.39
VPS4B-205ENST00000591383 HTR1BP28222 390 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms