RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SLITRK4Q8IW52 837 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PIANPQ8IYJ0 282 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 LSMEM2Q8N112 164 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 AVL9Q8NBF6 648 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 OR13J1Q8NGT2 312 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 WDR36Q8NI36 951 aaKnown RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 NAT14Q8WUY8 206 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 HDAC10Q969S8 669 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CCDC97Q96F63 343 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PRR11Q96HE9 360 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 AHCYL2Q96HN2 611 aaKnown RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF778Q96MU6 729 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SLC46A1Q96NT5 459 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 RANBP9Q96S59 729 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SEMA6CQ9H3T2 930 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 EPB41L5Q9HCM4 733 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ZDHHC3Q9NYG2 299 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF624Q9P2J8 865 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SLC2A6Q9UGQ3 507 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 RIMKLBQ9ULI2 386 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PCDHGA8Q9Y5G5 932 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 KIF26BQ2KJY2 2108 aa9.02□□□□□ -0.96
DNMT1-223ENST00000591239 URB1O60287 2271 aaKnown RBP9.02□□□□□ -0.96
DNMT1-223ENST00000591239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 IGHV5-10-1A0A0J9YXX1 117 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 GOLGA6L10A0A0M3HER8 536 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TCRBV7S3A2A0A539 114 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 CCDC162PA2VCL2 907 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PMS2P1A4D2B8 440 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 KLHL33A6NCF5 533 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 MGAT4DA6NG13 374 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 OR51F1A6NGY5 319 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 OR52A4PA6NMU1 304 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 AP3B1O00203 1094 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PLD2O14939 933 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TLX3O43711 291 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 VIPP01282 170 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 KRT14P02533 472 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 HOXB3P14651 431 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TCP1P17987 556 aaKnown RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TPSB2P20231 275 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 HALP42357 657 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PPM1FP49593 454 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PRLHRP49683 370 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 VPS41P49754 854 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TERF1P54274 439 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 SESN2P58004 480 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 ERVPABLB-1P60509 514 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 CRADDP78560 199 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 CFHR1Q03591 330 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 ACVR1Q04771 509 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 EIF3IQ13347 325 aaKnown RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 NFE2L1Q14494 772 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 CLCA4Q14CN2 919 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TPSAB1Q15661 275 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TBC1D25Q3MII6 688 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 BCL7AQ4VC05 210 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PHF19Q5T6S3 580 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 METRNLQ641Q3 311 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 IGF2-ASQ6U949 168 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 RAB11FIP2Q7L804 512 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 NLRP9Q7RTR0 991 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 OR4D9Q8NGE8 314 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 OR2L2Q8NH16 312 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 OR10G6Q8NH81 332 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 FGF11Q92914 225 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PEX13Q92968 403 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 LINC00615Q96LM1 132 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 ZNF578Q96N58 590 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-223ENST00000591239 DPYSL5Q9BPU6 564 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 IL22Q9GZX6 179 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 UCK1Q9HA47 277 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 SLC40A1Q9NP59 571 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 ASCL3Q9NQ33 180 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 CHRAC1Q9NRG0 131 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PSMD13Q9UNM6 376 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 WDR37Q9Y2I8 494 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 TCAF1Q9Y4C2 921 aa9.02□□□□□ -0.97
DNMT1-223ENST00000591239 PRAMEF33A0A0G2JMD5 474 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 LILRA5A6NI73 299 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 AGRPO00253 132 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 DUX1O43812 170 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 PHF2O75151 1096 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 TNFSF15O95150 251 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 GOT2P00505 430 aaKnown RBP9.01□□□□□ -0.97
DNMT1-223ENST00000591239 RBMS1P29558 406 aaKnown RBP9.01□□□□□ -0.97
DNMT1-223ENST00000591239 FOXN2P32314 431 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 CSF2RBP32927 897 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 MAGEA6P43360 314 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 NPY2RP49146 381 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 FNTAP49354 379 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 LIMK2P53671 638 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 EPHA4P54764 986 aa9.01□□□□□ -0.97
DNMT1-223ENST00000591239 PRAMEP78395 509 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms