RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF470Q6ECI4 717 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 DPY19L3Q6ZPD9 716 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 LARP4Q71RC2 724 aaKnown RBP eCLIP15.02□□□□□ -0.01
CIRBP-228ENST00000590347 BEND5Q7L4P6 421 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 GALNT7Q86SF2 657 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 FBXL6Q8N531 539 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 DTWD1Q8N5C7 304 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 ZNF557Q8N988 423 aaPredicted RBP15.02□□□□□ -0.01
CIRBP-228ENST00000590347 RMDN1Q96DB5 314 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 CHCHD6Q9BRQ6 235 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 PCDHB14Q9Y5E9 798 aa15.02□□□□□ -0.01
CIRBP-228ENST00000590347 RBBP6Q7Z6E9 1792 aaKnown RBP15.02□□□□□ -0.01
CIRBP-228ENST00000590347 ZNF646O15015 1829 aaPredicted RBP15.02□□□□□ -0.01
CIRBP-228ENST00000590347 AIREO43918 545 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 PTTG1O95997 202 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 UFM1P61960 85 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ESRP1Q6NXG1 681 aaKnown RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 PIWIL4Q7Z3Z4 852 aaKnown RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 B3GNT8Q7Z7M8 397 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 NOXA1Q86UR1 476 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 GLCCI1Q86VQ1 547 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 GPR22Q99680 433 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ANKEF1Q9NU02 776 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 HCN4Q9Y3Q4 1203 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 PCDHA9Q9Y5H5 950 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 NUP214P35658 2090 aaPredicted RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 B8ZZF3 427 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 NUPL2O15504 423 aaKnown RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 SLC10A3P09131 477 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 HSD17B1P14061 328 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 CRISP3P54108 245 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 RAB10P61026 200 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 STXBP2Q15833 593 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ZNF181Q2M3W8 571 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 NOMO2Q5JPE7 1267 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 TTC23Q5W5X9 447 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 CYS1Q717R9 158 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 C7orf57Q8NEG2 295 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 SPATA22Q8NHS9 363 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 SLC7A14Q8TBB6 771 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 YIPF6Q96EC8 236 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 MCMBPQ9BTE3 642 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 RHOBTB2Q9BYZ6 727 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 OR51E2Q9H255 320 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 TIGARQ9NQ88 270 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 LIMD1Q9UGP4 676 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 UBIAD1Q9Y5Z9 338 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 A0A096LPI6 279 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ISPDA4D126 451 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ASPDHA6ND91 283 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 LOC110117498-PIK3R3F6TDL0 507 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 FZD9O00144 591 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 HAT1O14929 419 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 NOS1APO75052 506 aaPredicted RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 C1RP00736 705 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 GSTM1P09488 218 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 POLR2CP19387 275 aaPredicted RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 C21orf33P30042 268 aaPredicted RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 TGM4P49221 684 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 GOLGA7BQ2TAP0 167 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ZNF648Q5T619 568 aaPredicted RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 OR4M1Q8NGD0 313 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 OR52K2Q8NGK3 314 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ANKRD49Q8WVL7 239 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 HDHD5Q9BXW7 423 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 KAT8Q9H7Z6 458 aaKnown RBP15.01□□□□□ -0.01
CIRBP-228ENST00000590347 MID1IP1Q9NPA3 183 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 NECTIN3Q9NQS3 549 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 ABCD2Q9UBJ2 740 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 DNAJC15Q9Y5T4 150 aa15.01□□□□□ -0.01
CIRBP-228ENST00000590347 BCKDKO14874 412 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 TNFRSF21O75509 655 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 DGAT1O75907 488 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 ARHGEF15O94989 841 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 NFICP08651 508 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 CLEC2LP0C7M8 214 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 RABGGTBP53611 331 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 YIF1BQ5BJH7 314 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 FAM217AQ8IXS0 508 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 PEX13Q92968 403 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 TRIM63Q969Q1 353 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 ESAMQ96AP7 390 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 FAM149B1Q96BN6 582 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 ACOX2Q99424 681 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 MEIOCA2RUB1 952 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 DSCR3O14972 297 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 B4GALT5O43286 388 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 FAM20BO75063 409 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 PRKCBP05771 671 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 APOA4P06727 396 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 CYP2A6P11509 494 aaPredicted RBP15□□□□□ -0.01
CIRBP-228ENST00000590347 MLNP12872 115 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 ATP5F1P24539 256 aaPredicted RBP15□□□□□ -0.01
CIRBP-228ENST00000590347 NDST1P52848 882 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 SH3BP2P78314 561 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 DCAF15Q66K64 600 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 PIM3Q86V86 326 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 ROPN1LQ96C74 230 aa15□□□□□ -0.01
CIRBP-228ENST00000590347 MSANTD3Q96H12 275 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms