RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 INSCQ1MX18 579 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 LDLRAP1Q5SW96 308 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 CDCP2Q5VXM1 449 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 C4orf22Q6V702 233 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 PPP1R21Q6ZMI0 780 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 RBM44Q6ZP01 1051 aaKnown RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 LRRTM4Q86VH4 590 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 CCNJLQ8IV13 435 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 SFTPA2Q8IWL1 248 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 CACTIN-AS1Q8N1I8 211 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 RASGEF1CQ8N431 466 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 DCBLD1Q8N8Z6 715 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 Q8N9G6 341 aaPredicted RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 DNAAF3Q8N9W5 541 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 ZNF398Q8TD17 642 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 COG1Q8WTW3 980 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 ZCCHC14Q8WYQ9 949 aaKnown RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 NXPE2Q96DL1 559 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 NAP1L3Q99457 506 aaPredicted RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 OSGEPL1Q9H4B0 414 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A7Q9HAW7 530 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A10Q9HAW8 530 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A8Q9HAW9 530 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 LRIT1Q9P2V4 623 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 RNF14Q9UBS8 474 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 CDC23Q9UJX2 597 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 KCNK6Q9Y257 313 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 KCTD3Q9Y597 815 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 ST14Q9Y5Y6 855 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 RNF215Q9Y6U7 377 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 ZNF106Q9H2Y7 1883 aaKnown RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 CHUKO15111 745 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ZW10O43264 779 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 SNX2O60749 519 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 CSO75390 466 aaKnown RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 TCEA3O75764 348 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 SRP72O76094 671 aaKnown RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 ECEL1O95672 775 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ZSCAN5DPP0CG00 497 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 SLC2A4P14672 509 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 PNLIPP16233 465 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ITGALP20701 1170 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 AKT1P31749 480 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ZNF140P52738 457 aaPredicted RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 CCL7P80098 99 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 CDH17Q12864 832 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 TMEM115Q12893 351 aaPredicted RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 POU6F1Q14863 301 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ST3GAL2Q16842 350 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 PLA2G4EQ3MJ16 856 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 PRUNE1Q86TP1 453 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 CREG2Q8IUH2 290 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 TRAPPC5Q8IUR0 188 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 NAGSQ8N159 534 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ARL14Q8N4G2 192 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 OR13C4Q8NGS5 318 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ACTRT1Q8TDG2 376 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 ABHD17AQ96GS6 310 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 MS4A14Q96JA4 679 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 GFM1Q96RP9 751 aaKnown RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 CCDC86Q9H6F5 360 aaKnown RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 ASB8Q9H765 288 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 L2HGDHQ9H9P8 463 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 KLC4Q9NSK0 619 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 PIH1D1Q9NWS0 290 aaKnown RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 CRLS1Q9UJA2 301 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 TMPRSS11EQ9UL52 423 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 TTC7AQ9ULT0 858 aaPredicted RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 PCYT1BQ9Y5K3 369 aaPredicted RBP10.22□□□□□ -0.77
SDF2-208ENST00000589788 MRFAP1Q9Y605 127 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 AK5Q9Y6K8 562 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 SLC30A1Q9Y6M5 507 aa10.22□□□□□ -0.77
SDF2-208ENST00000589788 TRBV23OR9-2A0A075B6M9 112 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 PGRMC1O00264 195 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 GAPDHSO14556 408 aaPredicted RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 EREGO14944 169 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 ZNF185O15231 689 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 GPR39O43194 453 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 LDB2O43679 373 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 RPLP0P05388 317 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 APRTP07741 180 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 RALBP11234 206 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 ZNF7P17097 686 aaPredicted RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 VCLP18206 1134 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 MSH3P20585 1137 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 ALDH4A1P30038 563 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 RPL22P35268 128 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 KCNJ1P48048 391 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 PPM1FP49593 454 aaPredicted RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 BASP1P80723 227 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 NFATC2Q13469 925 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 SEMA5AQ13591 1074 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 LAMB3Q13751 1172 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 WHAMMP3Q1A5X7 153 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 ISXQ2M1V0 245 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 TSNAXIP1Q2TAA8 658 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 KHDC1Q4VXA5 237 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 GPRC6AQ5T6X5 926 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms