RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TSPYL4Q9UJ04 414 aa3.38□□□□□ -1.87
SMAD4-207ENST00000589076 HACL1Q9UJ83 578 aa3.38□□□□□ -1.87
SMAD4-207ENST00000589076 KLHL20Q9Y2M5 609 aa3.38□□□□□ -1.87
SMAD4-207ENST00000589076 PCDHGA5Q9Y5G8 931 aa3.38□□□□□ -1.87
SMAD4-207ENST00000589076 MMP24Q9Y5R2 645 aa3.38□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF541Q9H0D2 1346 aa3.38□□□□□ -1.87
SMAD4-207ENST00000589076 LILRA5A6NI73 299 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 J3QR06 171 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 MID1O15344 667 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 IPO8O15397 1037 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 NDUFS4O43181 175 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 ZBTB43O43298 467 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF217O75362 1048 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 IGLV2-11P01706 119 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 SP1P08047 785 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 F7P08709 466 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 DAOP14920 347 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF12P17014 697 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 GJA1P17302 382 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 S1PR1P21453 382 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 ITGB8P26012 769 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 EEF1DP29692 281 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 CAPZA2P47755 286 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 CTSCP53634 463 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 DLX5P56178 289 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 TUBA1BP68363 451 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 SIRPAP78324 504 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 PPP2R2BQ00005 443 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 GAGE2BQ13066 116 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 CCDC6Q16204 474 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 GAGE2EQ4V326 116 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 KRTCAP3Q53RY4 240 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 FAM133BQ5BKY9 247 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 TCP11X2Q5H9J9 407 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 C9orf152Q5JTZ5 239 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 FAM109BQ6ICB4 259 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 RHBDF2Q6PJF5 856 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.37□□□□□ -1.875e-7■■■□□ 18.5
SMAD4-207ENST00000589076 HAUS6Q7Z4H7 955 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 RNF113BQ8IZP6 322 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 MUC20Q8N307 709 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 RFLNBQ8N5W9 214 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 SLC5A8Q8N695 610 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 TSPAN14Q8NG11 270 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 OR5R1Q8NH85 324 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 HMGCLL1Q8TB92 370 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 DUSP19Q8WTR2 217 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 TMED6Q8WW62 240 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 PTERQ96BW5 349 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF385AQ96PM9 386 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 SMC6Q96SB8 1091 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 CDRT15Q96T59 188 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 GFI1Q99684 422 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 CCDC106Q9BWC9 280 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 IL25Q9H293 177 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 PPIL3Q9H2H8 161 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 DDX31Q9H8H2 851 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 CHMP1AQ9HD42 196 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 TMEM30AQ9NV96 361 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 OCIAD1Q9NX40 245 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 RCC2Q9P258 522 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 GAGE2DQ9UEU5 116 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 SIX4Q9UIU6 781 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 ANAPC2Q9UJX6 822 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 WBP11Q9Y2W2 641 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 PTPRCP08575 1304 aa3.37□□□□□ -1.87
SMAD4-207ENST00000589076 PDS5AQ29RF7 1337 aaKnown RBP3.37□□□□□ -1.87
SMAD4-207ENST00000589076 SCN5AQ14524 2016 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 PRR23AA6NEV1 266 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 MAGEB17A8MXT2 336 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 UBE2CO00762 179 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 CLGNO14967 610 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF500O60304 480 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 KDM4BO94953 1096 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 VPREB1P12018 145 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 GM2AP17900 193 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 KCNA5P22460 613 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 TMPOP42166 694 aaKnown RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 MATR3P43243 847 aaKnown RBP eCLIP3.36□□□□□ -1.876e-9■■□□□ 12.9
SMAD4-207ENST00000589076 PDLIM4P50479 330 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 EEF1A1P68104 462 aaKnown RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 UBXN2AP68543 259 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 DLG1Q12959 904 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 KYNUQ16719 465 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 KRTAP24-1Q3LI83 254 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 CRY2Q49AN0 593 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 FAM98BQ52LJ0 330 aaKnown RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ERMARDQ5T6L9 678 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 EEF1A1P5Q5VTE0 462 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 KRT80Q6KB66 452 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ADAM5Q6NVV9 412 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF534Q76KX8 674 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 EXOC3L1Q86VI1 746 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 MAP7D3Q8IWC1 876 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 PM20D2Q8IYS1 436 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ACVR1CQ8NER5 493 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 OR10S1Q8NGN2 331 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms