RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CDH13P55290 713 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 BTKQ06187 659 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 MESP2Q0VG99 397 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 GALNT1Q10472 559 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-206ENST00000588860 KLF10Q13118 480 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 SNCBQ16143 134 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 RBBP7Q16576 425 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 LSM12Q3MHD2 195 aaKnown RBP8.65□□□□□ -1.02
SMAD4-206ENST00000588860 ATP13A5Q4VNC0 1218 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 METTL21CQ5VZV1 264 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 ERAP2Q6P179 960 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 SYCE2Q6PIF2 218 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 TXNDC11Q6PKC3 985 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 FRA10AC1Q70Z53 315 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 DPPA4Q7L190 304 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 PARS2Q7L3T8 475 aaKnown RBP8.65□□□□□ -1.02
SMAD4-206ENST00000588860 KIRREL3Q8IZU9 778 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 MYO1HQ8N1T3 1032 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 ZBTB2Q8N680 514 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 CLDN19Q8N6F1 224 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 POU5F2Q8N7G0 328 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 OR8D1Q8WZ84 308 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 MCUR1Q96AQ8 359 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 LRIG1Q96JA1 1093 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 MARK4Q96L34 752 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
SMAD4-206ENST00000588860 CATSPER2Q96P56 530 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 COPS8Q99627 209 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 MIPEPQ99797 713 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 KXD1Q9BQD3 176 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 FAM83CQ9BQN1 747 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 SPATA16Q9BXB7 569 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 CADM1Q9BY67 442 aaKnown RBP8.65□□□□□ -1.02
SMAD4-206ENST00000588860 ABCG8Q9H221 673 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 TNFRSF12AQ9NP84 129 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 MID1IP1Q9NPA3 183 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 RAD18Q9NS91 495 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 NUDT4Q9NZJ9 180 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 DKK3Q9UBP4 350 aa8.65□□□□□ -1.02
SMAD4-206ENST00000588860 CHD9Q3L8U1 2897 aa8.65□□□□□ -1.03
SMAD4-206ENST00000588860 TRPM6Q9BX84 2022 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 AGAP14A8MT82 685 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 STX16-NPEPL1H3BU86 382 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 STX16O14662 325 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 KLK8O60259 260 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 MAGEC1O60732 1142 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 CRCPO75575 148 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 ATP6V1G2O95670 118 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 PRNPP04156 253 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 RPS17P08708 135 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 EZRP15311 586 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 DGKAP23743 735 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 PIK3R1P27986 724 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 PRDX6P30041 224 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 HNRNPH1P31943 449 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 MMP12P39900 470 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 NSG1P42857 185 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 AGTR2P50052 363 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 DCDC1P59894 354 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 B4GALNT1Q00973 533 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 SATB1Q01826 763 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 RALGDSQ12967 914 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 NAA25Q14CX7 972 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 EIF4HQ15056 248 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 TTLL9Q3SXZ7 439 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 ACSBG2Q5FVE4 666 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 FBXO48Q5FWF7 155 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 GPRC6AQ5T6X5 926 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 ANKS6Q68DC2 871 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 CLEC6AQ6EIG7 209 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 TMEM184AQ6ZMB5 413 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 DET1Q7L5Y6 550 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 ADAMTSL2Q86TH1 951 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 SFTPA1Q8IWL2 248 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 TERB1Q8NA31 727 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 FBXO27Q8NI29 283 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 HCAR2Q8TDS4 363 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 TRPC4APQ8TEL6 797 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 ZNF483Q8TF39 744 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 UCMAQ8WVF2 138 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 DCUN1D1Q96GG9 259 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 PDLIM5Q96HC4 596 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 PANX3Q96QZ0 392 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 MYADMQ96S97 322 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 FAM126AQ9BYI3 521 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 PLA2G2FQ9BZM2 168 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 FAM83DQ9H4H8 585 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 MEAF6Q9HAF1 191 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 NPDC1Q9NQX5 325 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 KCTD5Q9NXV2 234 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 UTP6Q9NYH9 597 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 EIF2B4Q9UI10 523 aaKnown RBP8.64□□□□□ -1.03
SMAD4-206ENST00000588860 ITM2BQ9Y287 266 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 TRAF6Q9Y4K3 522 aa8.64□□□□□ -1.03
SMAD4-206ENST00000588860 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
SMAD4-206ENST00000588860 TRANK1O15050 2925 aa8.63□□□□□ -1.03
SMAD4-206ENST00000588860 IGLV3-16A0A075B6K0 115 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms