RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 METTL2BQ6P1Q9 378 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 DLEU7Q6UYE1 221 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 LINC00299Q6ZSB3 139 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 MIB1Q86YT6 1006 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 FAM126BQ8IXS8 530 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 GLB1L3Q8NCI6 653 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 LINGO1Q96FE5 620 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 SEPHS2Q99611 448 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 USE1Q9NZ43 259 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 PCDHB1Q9Y5F3 818 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 H7C0S8 307 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 TSPAN12O95859 305 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 EEF1B2P24534 225 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 GSTM2P28161 218 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 CDH4P55283 916 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 CTBSQ01459 385 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 CACNB2Q08289 660 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 PTPRCAPQ14761 206 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 FAM26DQ5JW98 314 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 ELMSAN1Q6PJG2 1045 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 CXCL17Q6UXB2 119 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 RASAL3Q86YV0 1011 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 CLEC4FQ8N1N0 589 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 ZNF555Q8NEP9 628 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 TRUB1Q8WWH5 349 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 BCL7BQ9BQE9 202 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 FEM1AQ9BSK4 669 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 TDRD1Q9BXT4 1180 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 PAIP1Q9H074 479 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 INTS7Q9NVH2 962 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 GALPQ9UBC7 116 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 ZNF510Q9Y2H8 683 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 ZNF711Q9Y462 761 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 E5RI56 91 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 KDELR3O43731 214 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 INHBBP09529 407 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 HOXD9P28356 352 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-206ENST00000587730 AKT1P31749 480 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 OXCT1P55809 520 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 OR4D2P58180 307 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 ECT2LQ008S8 904 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 NFATC3Q12968 1075 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 IL18R1Q13478 541 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 CYP20A1Q6UW02 462 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 TMEM26Q6ZUK4 368 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 OR2T11Q8NH01 316 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 METTL6Q8TCB7 284 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 CD200R1Q8TD46 325 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 GIPC3Q8TF64 312 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 CEP295NLQ96MC4 621 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 TMEM74Q96NL1 305 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 SCUBE2Q9NQ36 999 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 SMPD4Q9NXE4 827 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
DDX39A-206ENST00000587730 ZNF225Q9UK10 706 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 PSME2Q9UL46 239 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 SH3GLB1Q9Y371 365 aa18.34■□□□□ 0.53
DDX39A-206ENST00000587730 TDRD15B5MCY1 1934 aaKnown RBP18.34■□□□□ 0.53
DDX39A-206ENST00000587730 A0A1B0GTL3 188 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 A0A1W2PPW3 197 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 MYADML2A6NDP7 307 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 OR4F21O95013 312 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 SCELO95171 688 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 BCL10O95999 233 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 RPL10P27635 214 aaKnown RBP18.33■□□□□ 0.53
DDX39A-206ENST00000587730 AGTR2P50052 363 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 TGFBIQ15582 683 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 NEDD8Q15843 81 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 RFX4Q33E94 735 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 VARS2Q5ST30 1063 aaKnown RBP18.33■□□□□ 0.53
DDX39A-206ENST00000587730 IL31Q6EBC2 164 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 FRA10AC1Q70Z53 315 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 DTWD1Q8N5C7 304 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 CDYL2Q8N8U2 506 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 PJA1Q8NG27 643 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 TMBIM1Q969X1 311 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 PLEKHA8Q96JA3 519 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 MUS81Q96NY9 551 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 RBM4BQ9BQ04 359 aaKnown RBP18.33■□□□□ 0.53
DDX39A-206ENST00000587730 RBM4Q9BWF3 364 aaKnown RBP18.33■□□□□ 0.53
DDX39A-206ENST00000587730 MAGIXQ9H6Y5 334 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 NTN4Q9HB63 628 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 IKZF3Q9UKT9 509 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 EIF3LQ9Y262 564 aaKnown RBP18.33■□□□□ 0.53
DDX39A-206ENST00000587730 SPO11Q9Y5K1 396 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 ST14Q9Y5Y6 855 aa18.33■□□□□ 0.53
DDX39A-206ENST00000587730 G3V2T6 193 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 GSTA4O15217 222 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 CLIC3O95833 236 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 PIRTP0C851 137 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 IL1RNP18510 177 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 CR2P20023 1033 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 IL12AP29459 219 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 SLC11A2P49281 568 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 ANKRD26P1Q6NSI1 321 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 SLC2A7Q6PXP3 512 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 CERS6Q6ZMG9 384 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 Q6ZSR9 355 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms