RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 HIF1AQ16665 826 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 KCTD19Q17RG1 926 aaPredicted RBP12.22□□□□□ -0.45
ERCC2-207ENST00000586441 RANBP10Q6VN20 620 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 KDELC2Q7Z4H8 507 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 CLEC14AQ86T13 490 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 PIM3Q86V86 326 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 KLHDC8BQ8IXV7 354 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 SFRP1Q8N474 314 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 FAM71DQ8N9W8 422 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 GLIS1Q8NBF1 620 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 GLYATL1Q969I3 302 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 SH3KBP1Q96B97 665 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 ATXN7L3BQ96GX2 97 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 PRR11Q96HE9 360 aaPredicted RBP12.22□□□□□ -0.45
ERCC2-207ENST00000586441 SPATA16Q9BXB7 569 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 GBA3Q9H227 469 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 SAYSD1Q9NPB0 183 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 ZNHIT2Q9UHR6 403 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 ACSL6Q9UKU0 697 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 PCDHGA7Q9Y5G6 932 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 ST14Q9Y5Y6 855 aa12.22□□□□□ -0.45
ERCC2-207ENST00000586441 C5orf60A6NFR6 353 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 B4DGG1 531 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PLD2O14939 933 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 INPP4BO15327 924 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 GRID2O43424 1007 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 B4GAT1O43505 415 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 ETS1P14921 441 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 BPIP17213 487 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 RBL1P28749 1068 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 HPDP32754 393 aaPredicted RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PHBP35232 272 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 MDH1P40925 334 aaKnown RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 ACTR1BP42025 376 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 ABCG1P45844 678 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 INHBCP55103 352 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 ACTR1AP61163 376 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 GPLD1P80108 840 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PDE1BQ01064 536 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 TRA2AQ13595 282 aaKnown RBP eCLIP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PRPSAP1Q14558 356 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 KYNUQ16719 465 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 SIRPB2Q5JXA9 342 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 IYDQ6PHW0 289 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 DOK6Q6PKX4 331 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 SLC30A9Q6PML9 568 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 B4GALNT4Q76KP1 1039 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PDIK1LQ8N165 341 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 NAT8LQ8N9F0 302 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PTCD2Q8WV60 388 aaKnown RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 OXNAD1Q96HP4 312 aaPredicted RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 FSD1LQ9BXM9 530 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 ARNT2Q9HBZ2 717 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 SARS2Q9NP81 518 aaKnown RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 UBP1Q9NZI7 540 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 IL17CQ9P0M4 197 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 RSPH14Q9UHP6 348 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 SATB2Q9UPW6 733 aa12.21□□□□□ -0.45
ERCC2-207ENST00000586441 DNMT3AQ9Y6K1 912 aaPredicted RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 OAS3Q9Y6K5 1087 aaKnown RBP12.21□□□□□ -0.45
ERCC2-207ENST00000586441 PTPRQQ9UMZ3 2332 aa12.21□□□□□ -0.46
ERCC2-207ENST00000586441 KIR2DS5A0A0G2JLQ3 304 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 A0A0G2JNG1 304 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 KLHL33A6NCF5 533 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 E7EVH7 732 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 KIR2DS3K7RE56 304 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 HGSO14964 777 aaPredicted RBP12.2□□□□□ -0.46
ERCC2-207ENST00000586441 KMOO15229 486 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 KCNN4O15554 427 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 CDH16O75309 829 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 ADRA1AP35348 466 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 ATP1A2P50993 1020 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 UCNP55089 124 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 GDF10P55107 478 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 KIR2DS5Q14953 304 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 TNFAIP8L3Q5GJ75 292 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 C3orf38Q5JPI3 329 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 ANKRD20A2Q5SQ80 823 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 ANKRD20A1Q5TYW2 823 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 ANKRD20A3Q5VUR7 823 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 WASH2PQ6VEQ5 465 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 RAB11FIP2Q7L804 512 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 PRUNE1Q86TP1 453 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 TRIM74Q86UV6 250 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 TTC30BQ8N4P2 665 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 CPT1BQ92523 772 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 SPATA13Q96N96 652 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 CMKLR1Q99788 373 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.2□□□□□ -0.46
ERCC2-207ENST00000586441 EPB41L1Q9H4G0 881 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 UCK1Q9HA47 277 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 IL26Q9NPH9 171 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 WASH6PQ9NQA3 447 aa12.2□□□□□ -0.46
ERCC2-207ENST00000586441 ATXN10Q9UBB4 475 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms