RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ITPR2Q14571 2701 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 A1L4Q6 167 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 TCP11X1B4DZS4 312 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 GAPDHSO14556 408 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 CAPN1P07384 714 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 LPOP22079 712 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 KDELR1P24390 212 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 COL8A1P27658 744 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 DMPKQ09013 629 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 PCSK7Q16549 785 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 SLC9A4Q6AI14 798 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 DUS1LQ6P1R4 473 aaKnown RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 ALKBH5Q6P6C2 394 aaKnown RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 FBXO38Q6PIJ6 1188 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 NT5DC3Q86UY8 548 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 TRAPPC5Q8IUR0 188 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 RBMXL3Q8N7X1 1067 aaKnown RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 NAT14Q8WUY8 206 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 SYN2Q92777 582 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 ZNF501Q96CX3 271 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 TCTN2Q96GX1 697 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 AGAP3Q96P47 875 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 BPIFA3Q9BQP9 254 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 GPR63Q9BZJ6 419 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 SLC25A51Q9H1U9 297 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 CHST8Q9H2A9 424 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 RAD18Q9NS91 495 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 TMEM63CQ9P1W3 806 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 PSMD13Q9UNM6 376 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 FARSAQ9Y285 508 aaKnown RBP11.62□□□□□ -0.55
BRCA1-225ENST00000586385 HIVEP3Q5T1R4 2406 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
BRCA1-225ENST00000586385 A0A1W2PQJ5 194 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 OR5K3A6NET4 321 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 TLCD2A6NGC4 264 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 DDX3YO15523 660 aaKnown RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A9O60656 530 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 POP7O75817 140 aaKnown RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 NDST3O95803 873 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 CLDN1O95832 211 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 SERPING1P05155 500 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A6P19224 532 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A1P22309 533 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A4P22310 534 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 CD68P34810 354 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 ITGA1P56199 1179 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 ACY1Q03154 408 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 ABRQ12979 859 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 NFE2L1Q14494 772 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 ESPL1Q14674 2120 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 IQCB1Q15051 598 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 CHRNA6Q15825 494 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 SLC14A2Q15849 920 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 EIF2S3LQ2VIR3 472 aaKnown RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 ZNF789Q5FWF6 425 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 PLEKHS1Q5SXH7 462 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 IZUMO3Q5VZ72 239 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 ZNF787Q6DD87 383 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 JMJD6Q6NYC1 403 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 KMT5CQ86Y97 462 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 FDCSPQ8NFU4 85 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A7Q9HAW7 530 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A10Q9HAW8 530 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 UGT1A8Q9HAW9 530 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 HAUS2Q9NVX0 235 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 CUEDC1Q9NWM3 386 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
BRCA1-225ENST00000586385 CFAP20Q9Y6A4 193 aaKnown RBP11.61□□□□□ -0.55
BRCA1-225ENST00000586385 CREBBPQ92793 2442 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 CPNE3O75131 537 aaKnown RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 PMPCBO75439 489 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 SCRG1O75711 98 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 LCA5LO95447 670 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 MTHFD1P11586 935 aaKnown RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 RORAP35398 523 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 HMGCLP35914 325 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 CHRNA4P43681 627 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 KPNA2P52292 529 aaKnown RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 TUBB4BP68371 445 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 HSD11B2P80365 405 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 AP1B1Q10567 949 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 TUBB2AQ13885 445 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 FILIP1LQ4L180 1135 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 DNTTIP2Q5QJE6 756 aaKnown RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 SLC6A19Q695T7 634 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 KDELC1Q6UW63 502 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 FAM198BQ6UWH4 519 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 AMZ2Q86W34 360 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 MAP7D3Q8IWC1 876 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 SEC14L1Q92503 715 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 MR1Q95460 341 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 LRFN5Q96NI6 719 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms