RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CBX8Q9HC52 389 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 LRRC4CQ9HCJ2 640 aa14.17□□□□□ -0.14
SDF2-202ENST00000585428 LRRD1A4D1F6 860 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 APOL1O14791 398 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A9O60656 530 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 EPOP01588 193 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 ZFXP17010 805 aaPredicted RBP14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A6P19224 532 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A1P22309 533 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A4P22310 534 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 CASP14P31944 242 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 CA5AP35218 305 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 HALP42357 657 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 ACY1Q03154 408 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 TUBB3Q13509 450 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 MESDQ14696 234 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 SLC18A3Q16572 532 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 ZFYVE27Q5T4F4 411 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 PAPD7Q5XG87 772 aaKnown RBP14.16□□□□□ -0.14
SDF2-202ENST00000585428 METRNLQ641Q3 311 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 CERS6Q6ZMG9 384 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 FAM83HQ6ZRV2 1179 aaPredicted RBP14.16□□□□□ -0.14
SDF2-202ENST00000585428 B4GALNT4Q76KP1 1039 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 TRAPPC5Q8IUR0 188 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 D2HGDHQ8N465 521 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 TTC30BQ8N4P2 665 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 GALNT11Q8NCW6 608 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 SLC35G2Q8TBE7 412 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 TTC25Q96NG3 672 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 MAP3K3Q99759 626 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 TRABDQ9H4I3 376 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A7Q9HAW7 530 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A10Q9HAW8 530 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UGT1A8Q9HAW9 530 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 FGF21Q9NSA1 209 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 UBP1Q9NZI7 540 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.16□□□□□ -0.14
SDF2-202ENST00000585428 IL17CQ9P0M4 197 aa14.16□□□□□ -0.14
SDF2-202ENST00000585428 FARSAQ9Y285 508 aaKnown RBP14.16□□□□□ -0.14
SDF2-202ENST00000585428 TTLL8A6PVC2 850 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 VPS4BO75351 444 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 PMPCBO75439 489 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 SLC4A1P02730 911 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 EBLN1P0CF75 366 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 LPOP22079 712 aaPredicted RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 PTPN3P26045 913 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 CD68P34810 354 aaPredicted RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 ARHGAP25P42331 645 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 CTSCP53634 463 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 HSD11B2P80365 405 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 LRRC38Q5VT99 294 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 ZDHHC20Q5W0Z9 365 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 CAPRIN2Q6IMN6 1127 aaKnown RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 KLHL35Q6PF15 583 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 TMEM220Q6QAJ8 160 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 SYVN1Q86TM6 617 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 LUZP1Q86V48 1076 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 SLC38A9Q8NBW4 561 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 GPR150Q8NGU9 434 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 GDAP1Q8TB36 358 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 ZFPM2Q8WW38 1151 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 CTNNBL1Q8WYA6 563 aaPredicted RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 ZNF514Q96K75 400 aaPredicted RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 VPS4AQ9UN37 437 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 MAP4K5Q9Y4K4 846 aa14.15□□□□□ -0.14
SDF2-202ENST00000585428 PCDHGA9Q9Y5G4 932 aaKnown RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 UTP20O75691 2785 aaKnown RBP14.15□□□□□ -0.14
SDF2-202ENST00000585428 A0A0A6YYK5 440 aaPredicted RBP14.14□□□□□ -0.15
SDF2-202ENST00000585428 GAPDHSO14556 408 aaPredicted RBP14.14□□□□□ -0.15
SDF2-202ENST00000585428 PPP1R12AO14974 1030 aaPredicted RBP14.14□□□□□ -0.15
SDF2-202ENST00000585428 TMEM253P0C7T8 217 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 GNLYP22749 145 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 UQCRFS1P47985 274 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 NR2C2P49116 596 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 RPS18P62269 152 aaKnown RBP14.14□□□□□ -0.15
SDF2-202ENST00000585428 RPS15P62841 145 aaKnown RBP14.14□□□□□ -0.15
SDF2-202ENST00000585428 TUBB4BP68371 445 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 TUBB2AQ13885 445 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 GTF2H3Q13889 308 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 CHRNA6Q15825 494 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 LDLRAP1Q5SW96 308 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 IZUMO3Q5VZ72 239 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 KDELC1Q6UW63 502 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 DDHD1Q8NEL9 900 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 CPT1CQ8TCG5 803 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.14□□□□□ -0.15
SDF2-202ENST00000585428 CD180Q99467 661 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 TUBB2BQ9BVA1 445 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 ING2Q9H160 280 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 KCND1Q9NSA2 647 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 HRASLS2Q9NWW9 162 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 FAM153AQ9UHL3 310 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 PSMD13Q9UNM6 376 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 NBASA2RRP1 2371 aa14.14□□□□□ -0.15
SDF2-202ENST00000585428 USP9YO00507 2555 aaPredicted RBP14.13□□□□□ -0.15
SDF2-202ENST00000585428 OR5K3A6NET4 321 aa14.13□□□□□ -0.15
SDF2-202ENST00000585428 TLCD2A6NGC4 264 aa14.13□□□□□ -0.15
SDF2-202ENST00000585428 CEACAM4O75871 244 aa14.13□□□□□ -0.15
SDF2-202ENST00000585428 CCL11P51671 97 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms