RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SAT1P21673 171 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 AOAHP28039 575 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 CCR7P32248 378 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 CNR2P34972 360 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 NUBP1P53384 320 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 PGGT1BP53609 377 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 PMS2CLQ68D20 193 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 PAQR3Q6TCH7 311 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 RAPH1Q70E73 1250 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 IQCHQ86VS3 1027 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 CENPLQ8N0S6 344 aaPredicted RBP15.89■□□□□ 0.13
SS18-226ENST00000585241 ZBTB2Q8N680 514 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 SIDT2Q8NBJ9 832 aaKnown RBP15.89■□□□□ 0.13
SS18-226ENST00000585241 INPP5DQ92835 1189 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 PDLIM5Q96HC4 596 aaKnown RBP15.89■□□□□ 0.13
SS18-226ENST00000585241 HSPA12BQ96MM6 686 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 VPS11Q9H270 941 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 CEP192Q8TEP8 1941 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 C17orf113A0A1B0GUU1 675 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 KLHL33A6NCF5 533 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 TMEM202A6NGA9 273 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 MEI4A8MW99 385 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 COPEO14579 308 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 MAP3K13O43283 966 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 GPC4O75487 556 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 TRIM16O95361 564 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 ASMTLO95671 621 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 TSPAN12O95859 305 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 CBSLP0DN79 551 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 CBSP35520 551 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 CCT5P48643 541 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 RACK1P63244 317 aaKnown RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 IRF9Q00978 393 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 OVGP1Q12889 678 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 DLG1Q12959 904 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 TSNAXIP1Q2TAA8 658 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 TTLL9Q3SXZ7 439 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 PLEKHS1Q5SXH7 462 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 TPRG1LQ5T0D9 272 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 DOK6Q6PKX4 331 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 XKR5Q6UX68 686 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 Q6ZSR6 202 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 CDHR3Q6ZTQ4 885 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 LPCAT2Q7L5N7 544 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 MTERF4Q7Z6M4 381 aaKnown RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 LRRTM4Q86VH4 590 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 DCP2Q8IU60 420 aaKnown RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 PLD6Q8N2A8 252 aaKnown RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 NKAPQ8N5F7 415 aaKnown RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 MFSD2AQ8NA29 543 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 ZBTB44Q8NCP5 570 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 OR13H1Q8NG92 308 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 OR56A4Q8NGH8 313 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 ANKRD49Q8WVL7 239 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 SNX19Q92543 992 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 WDR92Q96MX6 357 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 SLC6A18Q96N87 628 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 GPR78Q96P69 363 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 CCM2Q9BSQ5 444 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 FGF22Q9HCT0 170 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 IGSF5Q9NSI5 407 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 GULP1Q9UBP9 304 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 DCDC2Q9UHG0 476 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 EIF2B4Q9UI10 523 aaKnown RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 PCYT1BQ9Y5K3 369 aaPredicted RBP15.88■□□□□ 0.13
SS18-226ENST00000585241 SLCO1B1Q9Y6L6 691 aa15.88■□□□□ 0.13
SS18-226ENST00000585241 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 SLC5A10A0PJK1 596 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 PRR19A6NJB7 356 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 KLHL2O95198 593 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 FUCA1P04066 466 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 LTA4HP09960 611 aaKnown RBP15.87■□□□□ 0.13
SS18-226ENST00000585241 SP9P0CG40 484 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 ITGB6P18564 788 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 NR1D1P20393 614 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 HTR1BP28222 390 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 OAS2P29728 719 aaKnown RBP15.87■□□□□ 0.13
SS18-226ENST00000585241 GMPRP36959 345 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 PPP2R2AP63151 447 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 WDR45BQ5MNZ6 344 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 OTOAQ7RTW8 1153 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 TBC1D1Q86TI0 1168 aaPredicted RBP15.87■□□□□ 0.13
SS18-226ENST00000585241 TRAPPC5Q8IUR0 188 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 TMEFF1Q8IYR6 380 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 SLC22A18ASQ8N1D0 253 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 BEND7Q8N7W2 519 aaPredicted RBP15.87■□□□□ 0.13
SS18-226ENST00000585241 OR2L2Q8NH16 312 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 HM13Q8TCT9 377 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 KCTD4Q8WVF5 259 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 FAM136AQ96C01 138 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 TIMM29Q9BSF4 260 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 DERL2Q9GZP9 239 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 ZSCAN32Q9NX65 697 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 CDYLQ9Y232 598 aa15.87■□□□□ 0.13
SS18-226ENST00000585241 SPTY2D1-AS1A0A0U1RR47 76 aa15.86■□□□□ 0.13
SS18-226ENST00000585241 TMEM120BA0PK00 339 aa15.86■□□□□ 0.13
SS18-226ENST00000585241 CCDC189A1A4V9 331 aa15.86■□□□□ 0.13
SS18-226ENST00000585241 PRSS38A1L453 326 aa15.86■□□□□ 0.13
SS18-226ENST00000585241 MGAT4DA6NG13 374 aa15.86■□□□□ 0.13
SS18-226ENST00000585241 KMOO15229 486 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms