RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GABRB3P28472 473 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 SPRP35270 261 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 SERPINB9P50453 376 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CTSCP53634 463 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 LIMK2P53671 638 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 EIF3BP55884 814 aaKnown RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 RPA4Q13156 261 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 ELOCQ15369 112 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CSRP2Q16527 193 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 LPAL2Q16609 132 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 KIF19Q2TAC6 998 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF658BQ4V348 819 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 FAM45BPQ6NSW5 357 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 LVRNQ6Q4G3 990 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 KDM7AQ6ZMT4 941 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CAPN12Q6ZSI9 719 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 STRA8Q7Z7C7 330 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 TRIM74Q86UV6 250 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 TRAPPC5Q8IUR0 188 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PHACTR4Q8IZ21 702 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 RIBC1Q8N443 379 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 FAM45AQ8TCE6 357 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 HM13Q8TCT9 377 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 GPBAR1Q8TDU6 330 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 GPR22Q99680 433 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 RBBP8Q99708 897 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 AARSD1Q9BTE6 412 aaKnown RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 TMEM109Q9BVC6 243 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 SLC13A1Q9BZW2 595 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CCDC68Q9H2F9 335 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CARS2Q9HA77 564 aaKnown RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 POPDC3Q9HBV1 291 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 APOBEC3BQ9UH17 382 aaKnown RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PCOLCE2Q9UKZ9 415 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PNMA8BQ9ULN7 279 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PCDHGB2Q9Y5G2 931 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 SNX11Q9Y5W9 270 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 PSAT1Q9Y617 370 aa10.24□□□□□ -0.77
CCDC47-203ENST00000580986 TMEM131Q92545 1883 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 OTOGLQ3ZCN5 2332 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 EXOC1LA0A1B0GW35 172 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 UBA6A0AVT1 1052 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 LNP1A1A4G5 178 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 MGAT4DA6NG13 374 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 TPP1O14773 563 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 LIN7AO14910 233 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 PIAS2O75928 621 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 INHBAP08476 426 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 JUNDP17535 347 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ATP5DP30049 168 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 SKIV2L2P42285 1042 aaKnown RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CCT8P50990 548 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 MPP1Q00013 466 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 POU4F1Q01851 419 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 NHLH1Q02575 133 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ILF3Q12906 894 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 DNAJC3Q13217 504 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 SLC14A1Q13336 389 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 GBX1Q14549 363 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF789Q5FWF6 425 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CTSL3PQ5NE16 218 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 UBAP2Q5T6F2 1119 aaKnown RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 PTRHD1Q6GMV3 140 aaKnown RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 LRRC8EQ6NSJ5 796 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 UGT3A1Q6NUS8 523 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF549Q6P9A3 640 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CNSTQ6PJW8 725 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 TMEM220Q6QAJ8 160 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 LAYNQ6UX15 382 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 WASH2PQ6VEQ5 465 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 TAOK1Q7L7X3 1001 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CROCCP2Q86T23 111 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 LDB1Q86U70 411 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 AMZ2Q86W34 360 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CTAGE3PQ8IX95 158 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CLDN19Q8N6F1 224 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 PPM1NQ8N819 430 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ISL2Q96A47 359 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 SGF29Q96ES7 293 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 VPS39Q96JC1 886 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 PAFAH2Q99487 392 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CCM2Q9BSQ5 444 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 LRRC61Q9BV99 259 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 GSDMCQ9BYG8 508 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ROPN1BQ9BZX4 212 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 DPEP2Q9H4A9 486 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ROPN1Q9HAT0 212 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CYP4F12Q9HCS2 524 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ARFGAP3Q9NP61 516 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 WASH6PQ9NQA3 447 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 FBXO6Q9NRD1 293 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 SPATS2LQ9NUQ6 558 aaKnown RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 DNAJC28Q9NX36 388 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 TAS2R13Q9NYV9 303 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 NCDNQ9UBB6 729 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms