RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 DNMT3AQ9Y6K1 912 aaPredicted RBP24.44■■□□□ 1.5
CDC42EP4-205ENST00000580315 SCN8AQ9UQD0 1980 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 BOD1L1Q8NFC6 3051 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 MAST4O15021 2626 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 KIF5CO60282 957 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 RALBP11234 206 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 ETS1P14921 441 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 GPLD1P80108 840 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 LAMB3Q13751 1172 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 TMEM220Q6QAJ8 160 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 SNX20Q7Z614 316 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 AMZ2Q86W34 360 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 JAMLQ86YT9 394 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 OR52K1Q8NGK4 314 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 STYXQ8WUJ0 223 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 DCUN1D1Q96GG9 259 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 AHCYL2Q96HN2 611 aaKnown RBP24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 DNAJC1Q96KC8 554 aaKnown RBP24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 DPYSL5Q9BPU6 564 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 ZMYND15Q9H091 742 aa24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 NLE1Q9NVX2 485 aaPredicted RBP24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 PIH1D1Q9NWS0 290 aaKnown RBP24.43■■□□□ 1.5
CDC42EP4-205ENST00000580315 IGHV1OR21-1A0A087WYE8 117 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 CD1CP29017 333 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 MC4RP32245 332 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 CA5AP35218 305 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 RPL22P35268 128 aaKnown RBP24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 CTSCP53634 463 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 TGIF1Q15583 401 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 GPR33Q49SQ1 333 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 USP53Q70EK8 1073 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 C11orf96Q7Z7L8 435 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 PRUNE1Q86TP1 453 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 OR10G6Q8NH81 332 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 HEXDCQ8WVB3 486 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 NAP1L3Q99457 506 aaPredicted RBP24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 CLMPQ9H6B4 373 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 RDH14Q9HBH5 336 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 CPNE7Q9UBL6 633 aa24.42■■□□□ 1.5
CDC42EP4-205ENST00000580315 OR2AG2A6NM03 316 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 AGAP14A8MT82 685 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 CFAP99D6REC4 459 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 H7C0S8 307 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 SLC28A2O43868 658 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 POP7O75817 140 aaKnown RBP24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 APRTP07741 180 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 ZFP36L1Q07352 338 aaKnown RBP24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 SEPT7Q16181 437 aaKnown RBP24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 SKIDA1Q1XH10 827 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 FNBP1LQ5T0N5 605 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 PHF19Q5T6S3 580 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 AGAP9Q5VTM2 703 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 WASH2PQ6VEQ5 465 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 SLITRK4Q8IW52 837 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 TRIM48Q8IWZ4 208 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 NXPE1Q8N323 547 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 EXD3Q8N9H8 876 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 GLIS1Q8NBF1 620 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 TMEM159Q96B96 161 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 PDLIM2Q96JY6 352 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 COPS8Q99627 209 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 WASH6PQ9NQA3 447 aa24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 TRMT1Q9NXH9 659 aaKnown RBP24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 AKAP7Q9P0M2 348 aaPredicted RBP24.41■■□□□ 1.5
CDC42EP4-205ENST00000580315 KLHL33A6NCF5 533 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 PRR19A6NJB7 356 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 CCL22O00626 93 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 NVLO15381 856 aaKnown RBP24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 DUX1O43812 170 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 VIPP01282 170 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 JMJD7P0C870 316 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 ZSCAN5DPP0CG00 497 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 XRCC1P18887 633 aaPredicted RBP24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 HALP42357 657 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 SQSTM1Q13501 440 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 ZRANB3Q5FWF4 1079 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 NKAIN2Q5VXU1 208 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 ABRAXAS1Q6UWZ7 409 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 DET1Q7L5Y6 550 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 ZNF761Q86XN6 746 aaPredicted RBP24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 SLC35F6Q8N357 371 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 RASGEF1CQ8N431 466 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 PRELID2Q8N945 189 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 NUDT22Q9BRQ3 303 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 FAM96AQ9H5X1 160 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 PISDQ9UG56 409 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 LOXL2Q9Y4K0 774 aa24.4■■□□□ 1.5
CDC42EP4-205ENST00000580315 HEATR9A2RTY3 570 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 MROH6A6NGR9 719 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 RPL10P27635 214 aaKnown RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 KCNJ1P48048 391 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 EPHA4P54764 986 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 UBE2IP63279 158 aaKnown RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 BASP1P80723 227 aaKnown RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 KCNC4Q03721 635 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 DMPKQ09013 629 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 SRSF6Q13247 344 aaKnown RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 LINC00303Q3SY05 128 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 TAS2R42Q7RTR8 314 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 SGF29Q96ES7 293 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms