RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 AMD1P17707 334 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 ITIH1P19827 911 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 MPSTP25325 297 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 ACRV1P26436 265 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 CSTF2P33240 577 aaKnown RBP eCLIP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 CA5AP35218 305 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 RPL22P35268 128 aaKnown RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 EIF2S3P41091 472 aaKnown RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 KCNJ1P48048 391 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TERF1P54274 439 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 UBE2IP63279 158 aaKnown RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 PRAMEP78395 509 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 XIAPP98170 497 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 ZFP36L1Q07352 338 aaKnown RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 DMPKQ09013 629 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TRA2AQ13595 282 aaKnown RBP eCLIP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 COL28A1Q2UY09 1125 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 BCL7AQ4VC05 210 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TMEM164Q5U3C3 297 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 AGAP9Q5VTM2 703 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 BROXQ5VW32 411 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 IGF2-ASQ6U949 168 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 AFTPHQ6ULP2 937 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TMEM26Q6ZUK4 368 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TMPRSS9Q7Z410 1059 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 C11orf96Q7Z7L8 435 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 SERPINA9Q86WD7 417 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 FAM129CQ86XR2 697 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 OTUD6BQ8N6M0 293 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 NAT14Q8WUY8 206 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 NCSTNQ92542 709 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 CCDC97Q96F63 343 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 SLC46A1Q96NT5 459 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TTC1Q99614 292 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TBC1D10AQ9BXI6 508 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 AP1M1Q9BXS5 423 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 EIF2B3Q9NR50 452 aaKnown RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 ZDHHC3Q9NYG2 299 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 SCHIP1Q9P0W5 487 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 TTC7AQ9ULT0 858 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 DRG1Q9Y295 367 aaKnown RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 DNMT3AQ9Y6K1 912 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 MGAT4DA6NG13 374 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 A8MU76 341 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 H7C0S8 307 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 AP3B1O00203 1094 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 KLK10O43240 276 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 THRAP10827 490 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 ATP1B2P14415 290 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 TYRP1P17643 537 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 XRCC1P18887 633 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 SLC19A1P41440 591 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 PRLHRP49683 370 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 LIMK2P53671 638 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 SESN2P58004 480 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 MSLNQ13421 630 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 KRT33BQ14525 404 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 GSE1Q14687 1217 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 C16orf72Q14CZ0 275 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 TRIP13Q15645 432 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 TMEM71Q6P5X7 295 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 ZNF449Q6P9G9 518 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 ABRAXAS1Q6UWZ7 409 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 WASH2PQ6VEQ5 465 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 NLRP9Q7RTR0 991 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 RBM12BQ8IXT5 1001 aaKnown RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 PRELID2Q8N945 189 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 AGBL5Q8NDL9 886 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 OR6P1Q8NGX9 317 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 HM13Q8TCT9 377 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 MAGOHBQ96A72 148 aaKnown RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 CDKN2AIPNLQ96HQ2 116 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 MS4A14Q96JA4 679 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 C12orf66Q96MD2 445 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 OSBPL9Q96SU4 736 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 WWP1Q9H0M0 922 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 CASS4Q9NQ75 786 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 WASH6PQ9NQA3 447 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 SMARCAL1Q9NZC9 954 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 TMEM9Q9P0T7 183 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 ZNF624Q9P2J8 865 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-208ENST00000580237 TCAF1Q9Y4C2 921 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 SDK2Q58EX2 2172 aa10.69□□□□□ -0.7
NDEL1-208ENST00000580237 PRAMEF33A0A0G2JMD5 474 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 CCDC162PA2VCL2 907 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 MROH6A6NGR9 719 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 OR51F1A6NGY5 319 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 CDRT15L2A8MXV6 281 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 F8W8V4 182 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 PRAMEF10O60809 474 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 RASSF9O75901 435 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 UBXN7O94888 489 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 POLBP06746 335 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 PRSS56P0CW18 603 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 MTHFD1P11586 935 aaKnown RBP10.68□□□□□ -0.7
NDEL1-208ENST00000580237 HOXB3P14651 431 aaPredicted RBP10.68□□□□□ -0.7
NDEL1-208ENST00000580237 BRAFP15056 766 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 ADRA1DP25100 572 aa10.68□□□□□ -0.7
NDEL1-208ENST00000580237 ITPKBP27987 946 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms