RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 VIPR2P41587 438 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ACADVLP49748 655 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 HNMTP50135 292 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 CDH13P55290 713 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 PLOD1Q02809 727 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 SP140Q13342 867 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ELAVL3Q14576 367 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 HNRNPA1L2Q32P51 320 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 KANK2Q63ZY3 851 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 FBXL19Q6PCT2 694 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ZNF765Q7L2R6 523 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 GET4Q7L5D6 327 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 NLRP8Q86W28 1048 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ZSWIM9Q86XI8 627 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ETFBKMTQ8IXQ9 262 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 DDIASQ8IXT1 998 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 PCYOX1LQ8NBM8 494 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 PDPRQ8NCN5 879 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 MCOLN3Q8TDD5 553 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 TSPEARQ8WU66 669 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 TWIST2Q8WVJ9 160 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ASZ1Q8WWH4 475 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 UTP4Q969X6 686 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 PRR11Q96HE9 360 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 VPS35Q96QK1 796 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 MIPEPQ99797 713 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 NSUN3Q9H649 340 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 IGFLR1Q9H665 355 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 RNPEPL1Q9HAU8 725 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 PCDH12Q9NPG4 1184 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 WWOXQ9NZC7 414 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 OPTCQ9UBM4 332 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ANGPTL2Q9UKU9 493 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 COLQQ9Y215 455 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 YBX2Q9Y2T7 364 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 NUMBLQ9Y6R0 609 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 MYLKQ15746 1914 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 DYTNA2CJ06 578 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ARHGEF15O94989 841 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 APODP05090 189 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 IDO1P14902 403 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 HMOX2P30519 316 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ARL1P40616 181 aaPredicted RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 MTHFRP42898 656 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 CCR10P46092 362 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 CCNG1P51959 295 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 AP2B1P63010 937 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 SH3BP2P78314 561 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 MAD2L1Q13257 205 aaPredicted RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 RUNX3Q13761 415 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 GTF2H3Q13889 308 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 KCNC3Q14003 757 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ACOX1Q15067 660 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 PTPRRQ15256 657 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 KIF19Q2TAC6 998 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 SMU1Q2TAY7 513 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ATP13A5Q4VNC0 1218 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 C1orf146Q5VVC0 180 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 TMEM215Q68D42 235 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ANKRD54Q6NXT1 300 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 AAGABQ6PD74 315 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ATG14Q6ZNE5 492 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 CYP2U1Q7Z449 544 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 SNX32Q86XE0 403 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ULK2Q8IYT8 1036 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 PNPLA1Q8N8W4 532 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 PPFIBP2Q8ND30 876 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 BTN2A2Q8WVV5 523 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ATL1Q8WXF7 558 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 TUBGCP3Q96CW5 907 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 ZNF514Q96K75 400 aaPredicted RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 PPP1R36Q96LQ0 422 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 FOPNLQ96NB1 174 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 FAM83CQ9BQN1 747 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 EBF3Q9H4W6 596 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 EPHX3Q9H6B9 360 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 SEMA4BQ9NPR2 832 aaPredicted RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 GALPQ9UBC7 116 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 PTBP2Q9UKA9 531 aaKnown RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 PCTPQ9UKL6 214 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 G3BP2Q9UN86 482 aaKnown RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 NDUFAF1Q9Y375 327 aa10.96□□□□□ -0.65
SKA2-204ENST00000578519 COPG1Q9Y678 874 aaKnown RBP10.96□□□□□ -0.65
SKA2-204ENST00000578519 KIAA0100Q14667 2235 aaKnown RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 NCF1BA6NI72 391 aaPredicted RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 IQCF5A8MTL0 148 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 NCF1CA8MVU1 366 aaPredicted RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 K7EPI3 171 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 SLC28A1O00337 649 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 AIM2O14862 343 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 NUAK1O60285 661 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 CCNT2O60583 730 aaKnown RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 ATG13O75143 517 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 WDR47O94967 919 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 SIX3O95343 332 aaPredicted RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 NCF1P14598 390 aaPredicted RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 ARSAP15289 507 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PSMC3P17980 439 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms