RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 SLC9B2Q86UD5 537 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 BEND7Q8N7W2 519 aaPredicted RBP21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 AVL9Q8NBF6 648 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 NAT14Q8WUY8 206 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 SLCO2A1Q92959 643 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 WASH6PQ9NQA3 447 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 SYBUQ9NX95 663 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 SCHIP1Q9P0W5 487 aaPredicted RBP21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 LHX6Q9UPM6 363 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 PCDHB1Q9Y5F3 818 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 IGSF10Q6WRI0 2623 aa21.8■■□□□ 1.08
SMARCD2-206ENST00000577990 B4GAT1O43505 415 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 SGTAO43765 313 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 RPL10P27635 214 aaKnown RBP21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 ALDH4A1P30038 563 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 CASQ1P31415 396 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 PRLHRP49683 370 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 PDX1P52945 283 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 PRAMEP78395 509 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 PTK6Q13882 451 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 ABRAXAS1Q6UWZ7 409 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 MCUQ8NE86 351 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 OR6P1Q8NGX9 317 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 GRAMD1AQ96CP6 724 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 LINC00615Q96LM1 132 aaPredicted RBP21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 RUNDC3BQ96NL0 473 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 MRM3Q9HC36 420 aaKnown RBP21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 CPNE7Q9UBL6 633 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 DKK4Q9UBT3 224 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 LOC400499M0QZD8 3231 aa21.79■■□□□ 1.08
SMARCD2-206ENST00000577990 KLHL33A6NCF5 533 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 MGAT4DA6NG13 374 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 MLNP12872 115 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 PTGIRP43119 386 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 DRG2P55039 364 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 UBE2IP63279 158 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 NFE2L1Q14494 772 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 ITIH4Q14624 930 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 AMZ1Q400G9 498 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 FAM83HQ6ZRV2 1179 aaPredicted RBP21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 CAND1Q86VP6 1230 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 KLHL7Q8IXQ5 586 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 OR2L2Q8NH16 312 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 OR4L1Q8NH43 312 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 SH3KBP1Q96B97 665 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 NXPE2Q96DL1 559 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 SLC38A3Q99624 504 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 KIFC1Q9BW19 673 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 NRSN2Q9GZP1 204 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 XAB2Q9HCS7 855 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 TREX1Q9NSU2 369 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 ASIC3Q9UHC3 531 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 ATXN7L1Q9ULK2 861 aaPredicted RBP21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 ENTPD2Q9Y5L3 495 aa21.78■■□□□ 1.08
SMARCD2-206ENST00000577990 CCDC188H7C350 402 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 BRAFP15056 766 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 XRCC1P18887 633 aaPredicted RBP21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 LYPLAL1Q5VWZ2 237 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 ARMC3Q5W041 872 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 SYT10Q6XYQ8 523 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 ZNF761Q86XN6 746 aaPredicted RBP21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 PPIL6Q8IXY8 311 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 NAT8LQ8N9F0 302 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 SGSM3Q96HU1 749 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 KCNK4Q9NYG8 393 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 SOX13Q9UN79 622 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 WDR37Q9Y2I8 494 aa21.77■■□□□ 1.08
SMARCD2-206ENST00000577990 IGHV1OR21-1A0A087WYE8 117 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 GOLGA8MH3BSY2 632 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 AVILO75366 819 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 AP2A2O94973 939 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 VIPP01282 170 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 NMBRP28336 390 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 HALP42357 657 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 NSG1P42857 185 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 CLPPQ16740 277 aaPredicted RBP21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 COL28A1Q2UY09 1125 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 MAP9Q49MG5 647 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 FASTKD1Q53R41 847 aaKnown RBP21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 METRNLQ641Q3 311 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 PACS1Q6VY07 963 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 CERS6Q6ZMG9 384 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 SYDE1Q6ZW31 735 aaPredicted RBP21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 B3GNT8Q7Z7M8 397 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 TRIM48Q8IWZ4 208 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 HM13Q8TCT9 377 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 HNRNPLLQ8WVV9 542 aaKnown RBP21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 ATXN7L3BQ96GX2 97 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 TMEM74Q96NL1 305 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 SERPINB12Q96P63 405 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 TTC1Q99614 292 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 VPS37BQ9H9H4 285 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 ZNF624Q9P2J8 865 aaPredicted RBP21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 PIKFYVEQ9Y2I7 2098 aa21.76■■□□□ 1.07
SMARCD2-206ENST00000577990 OR52A4PA6NMU1 304 aa21.75■■□□□ 1.07
SMARCD2-206ENST00000577990 TMX2-CTNND1H3BSU7 103 aa21.75■■□□□ 1.07
SMARCD2-206ENST00000577990 CPNE6O95741 557 aa21.75■■□□□ 1.07
SMARCD2-206ENST00000577990 CD1CP29017 333 aa21.75■■□□□ 1.07
SMARCD2-206ENST00000577990 SLC19A1P41440 591 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms