RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 GPR18Q14330 331 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 ANKS6Q68DC2 871 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 TMEM220Q6QAJ8 160 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 WASH2PQ6VEQ5 465 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 ARHGEF18Q6ZSZ5 1173 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 DET1Q7L5Y6 550 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 AMZ2Q86W34 360 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 TAB3Q8N5C8 712 aaPredicted RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 RNF10Q8N5U6 811 aaKnown RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 AVL9Q8NBF6 648 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 JPH3Q8WXH2 748 aaPredicted RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 TTC9Q92623 222 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 TAAR9Q96RI9 348 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 B3GNT4Q9C0J1 378 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 ASB8Q9H765 288 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 SLC40A1Q9NP59 571 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 WASH6PQ9NQA3 447 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 POT1Q9NUX5 634 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 GUCA1BQ9UMX6 200 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 SNRNP200O75643 2136 aaKnown RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 ERVH48-1M5A8F1 160 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 POP7O75817 140 aaKnown RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 CD82P27701 267 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 PARP6Q2NL67 630 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 FNBP1LQ5T0N5 605 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 TRIM48Q8IWZ4 208 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 RSC1A1Q92681 617 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 SGF29Q96ES7 293 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 DNAJC1Q96KC8 554 aaKnown RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 DDA1Q9BW61 102 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 EPB41L1Q9H4G0 881 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 FAM96AQ9H5X1 160 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 APMAPQ9HDC9 416 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 PIH1D1Q9NWS0 290 aaKnown RBP12.44□□□□□ -0.42
SSH2-205ENST00000577483 SLC39A1Q9NY26 324 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 PSMD13Q9UNM6 376 aa12.44□□□□□ -0.42
SSH2-205ENST00000577483 B4E171 279 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 STMND1H3BQB6 276 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 UBXN7O94888 489 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 CRTAMO95727 393 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 C9P02748 559 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 TPH1P17752 444 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 VCLP18206 1134 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 MSH3P20585 1137 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 TSPAN7P41732 249 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 LEPRP48357 1165 aaKnown RBP12.43□□□□□ -0.42
SSH2-205ENST00000577483 CDKN1CP49918 316 aaPredicted RBP12.43□□□□□ -0.42
SSH2-205ENST00000577483 GSDMDP57764 484 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 RHDQ02161 417 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 OASLQ15646 514 aaKnown RBP12.43□□□□□ -0.42
SSH2-205ENST00000577483 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 CTRCQ99895 268 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 TSGA10Q9BZW7 698 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 BSNQ9UPA5 3926 aa12.43□□□□□ -0.42
SSH2-205ENST00000577483 BOD1L1Q8NFC6 3051 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 BAHCC1Q9P281 2608 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 ARHGAP6O43182 974 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 LIASO43766 372 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 KRT86O43790 486 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 ZNF189O75820 626 aaPredicted RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 AP2A1O95782 977 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 ANKRD34CP0C6C1 535 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 PRSS56P0CW18 603 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 HALP42357 657 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 CAPZBP47756 277 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 PPP1CAP62136 330 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 PDE1BQ01064 536 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 POU6F1Q14863 301 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 RPE65Q16518 533 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 LONRF2Q1L5Z9 754 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 P3H1Q32P28 736 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 MANEAQ5SRI9 462 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 SEL1L2Q5TEA6 688 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 MEI1Q5TIA1 1274 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 METRNLQ641Q3 311 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 DUS1LQ6P1R4 473 aaKnown RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 PRUNE1Q86TP1 453 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 SLC13A5Q86YT5 568 aaPredicted RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 PLXDC1Q8IUK5 500 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 NXPE1Q8N323 547 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 LILRA3Q8N6C8 439 aaPredicted RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 CCDC112Q8NEF3 446 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 NKD1Q969G9 470 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 C9orf72Q96LT7 481 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 TGM7Q96PF1 710 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 SEMA4CQ9C0C4 833 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 LRRC40Q9H9A6 602 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 SIDT1Q9NXL6 827 aaKnown RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 FEZ2Q9UHY8 353 aaPredicted RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 CRLS1Q9UJA2 301 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 CFAP20Q9Y6A4 193 aaKnown RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 DNMT3AQ9Y6K1 912 aaPredicted RBP12.42□□□□□ -0.42
SSH2-205ENST00000577483 CFAP46Q8IYW2 2715 aa12.42□□□□□ -0.42
SSH2-205ENST00000577483 EIF4E1BA6NMX2 242 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms