RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ANGPT4Q9Y264 503 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SPEF1Q9Y4P9 236 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 RBM47A0AV96 593 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRMT5O14744 637 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 CASKO14936 926 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SSNA1O43805 119 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 PSIP1O75475 530 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC6A2P23975 617 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SCNN1AP37088 669 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 TRIM71Q2Q1W2 868 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 ANKRD46Q86W74 232 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC29A1Q99808 456 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 ANKRD60Q9BZ19 345 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 TFB2MQ9H5Q4 396 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 AASDHPPTQ9NRN7 309 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 PTGFRNQ9P2B2 879 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 ACLYP53396 1101 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 DAOAP59103 153 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 BCL2L1Q07817 233 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PCBP1Q15365 356 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 CCL15Q16663 113 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SYPL2Q5VXT5 272 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 GPR65Q8IYL9 337 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 UBE2J2Q8N2K1 259 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 CRYGNQ8WXF5 182 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 FCRL3Q96P31 734 aaPredicted RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRDM5Q9NQX1 630 aaPredicted RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 GIMAP2Q9UG22 337 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 VPS4AQ9UN37 437 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 YJEFN3A6XGL0 299 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 GLDCP23378 1020 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 IFNGR2P38484 337 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC15A1P46059 708 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 HSPA7P48741 367 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 UGT2B15P54855 530 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 TUBA1BP68363 451 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 ABATP80404 500 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 NAPRTQ6XQN6 538 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 TUBA1AQ71U36 451 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 GLB1L3Q8NCI6 653 aaPredicted RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PARK7Q99497 189 aaKnown RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SMURF2Q9HAU4 748 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRORSD1PA6NEY8 169 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 INMTO95050 263 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SNX4O95219 450 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 NDST3O95803 873 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 MYF6P23409 242 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 NOVP48745 357 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 DNAJB13P59910 316 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 IKBIPQ70UQ0 350 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 OR52J3Q8NH60 311 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PPP1R13LQ8WUF5 828 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC35F5Q8WV83 523 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 REPS1Q96D71 796 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 CNPPD1Q9BV87 410 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRELID1Q9Y255 219 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 CFL2Q9Y281 166 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 TXNL4AP83876 142 aaKnown RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 PTSQ03393 145 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 MXD1Q05195 221 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 MFSD10Q14728 455 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 CYP2A13Q16696 494 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 TBC1D25Q3MII6 688 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SPATS1Q496A3 300 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 STEAP4Q687X5 459 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 CYP2U1Q7Z449 544 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 LIX1Q8N485 282 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 NTAN1Q96AB6 310 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 NARS2Q96I59 477 aaKnown RBP12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 POLE4Q9NR33 117 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 NUDT4Q9NZJ9 180 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZIM2Q9NZV7 527 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC2A6Q9UGQ3 507 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
PCDHGB3-201ENST00000576222 HOXD12P35452 270 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 ATP4BP51164 291 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 UFM1P61960 85 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 NIPAL4Q0D2K0 466 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 ATP6AP1Q15904 470 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC2A7Q6PXP3 512 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 CYP20A1Q6UW02 462 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 TAC4Q86UU9 113 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 NLNQ9BYT8 704 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 IRF2BPLQ9H1B7 796 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 PIGVQ9NUD9 493 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 TSPAN1O60635 241 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 RGS20O76081 388 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 YES1P07947 543 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 BMP2P12643 396 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRKACGP22612 351 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 ST8SIA6P61647 398 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms