RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CAPN1P07384 714 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 CA4P22748 312 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 ITGA3P26006 1051 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 HALP42357 657 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 MYBPC3Q14896 1274 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 ANO6Q4KMQ2 910 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 FBXO38Q6PIJ6 1188 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 IGFL3Q6UXB1 125 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 FJX1Q86VR8 437 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 RAB43Q86YS6 212 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZNF547Q8IVP9 402 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 GALNT16Q8N428 558 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 CLEC1AQ8NC01 280 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 TM9SF4Q92544 642 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 HSPH1Q92598 858 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 LYSMD1Q96S90 227 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 TRIM7Q9C029 511 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZNF552Q9H707 407 aaPredicted RBP15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZBTB20Q9HC78 741 aaPredicted RBP15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 HRASLS2Q9NWW9 162 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 SOHLH2Q9NX45 425 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 POLEQ07864 2286 aa15.9■□□□□ 0.14
CTDNEP1-211ENST00000575783 ZBTB11O95625 1053 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 SNRPB2P08579 225 aaKnown RBP15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 VCLP18206 1134 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 RPL26P61254 145 aaKnown RBP15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 QPCTQ16769 361 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 SMTNL2Q2TAL5 461 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 PTCHD3Q3KNS1 767 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 KRTAP21-3Q3LHN1 58 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 FAM198BQ6UWH4 519 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 Q6ZS92 163 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 GDF7Q7Z4P5 450 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 POLNQ7Z5Q5 900 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 SYTL1Q8IYJ3 562 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 GPR26Q8NDV2 337 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 GPR150Q8NGU9 434 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 GLYATL1Q969I3 302 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 FER1L6-AS2Q96M78 137 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 CSPG4P5Q96PW8 444 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 CD180Q99467 661 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 TLR10Q9BXR5 811 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 RBM22Q9NW64 420 aaKnown RBP eCLIP15.89■□□□□ 0.132e-6■□□□□ 11.1
CTDNEP1-211ENST00000575783 TAS2R14Q9NYV8 317 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 PSMD13Q9UNM6 376 aa15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 RPL26L1Q9UNX3 145 aaKnown RBP15.89■□□□□ 0.13
CTDNEP1-211ENST00000575783 CCDC168Q8NDH2 2452 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 OR5K3A6NET4 321 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 TMEM191CA6NGB0 347 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 MASP2O00187 686 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 LDB2O43679 373 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 SLC4A1P02730 911 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 CES1P23141 567 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 RORAP35398 523 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 NIPAL4Q0D2K0 466 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 ABRQ12979 859 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 NCF4Q15080 339 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 MRGPREQ86SM8 312 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 TRAPPC5Q8IUR0 188 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 EID2BQ96D98 161 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 ZSCAN5AQ9BUG6 496 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 SLC7A5P2Q9GIP4 190 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 ACTR5Q9H9F9 607 aaPredicted RBP15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 LATS2Q9NRM7 1088 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 PCMTD2Q9NV79 361 aa15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 DIDO1Q9BTC0 2240 aaKnown RBP15.88■□□□□ 0.13
CTDNEP1-211ENST00000575783 ANKRD66B4E2M5 251 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 PEX12O00623 359 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 VEGFDO43915 354 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 KLHL41O60662 606 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 IPO13O94829 963 aaKnown RBP15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 CYP2A7P20853 494 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 EEF1GP26641 437 aaKnown RBP15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 IL1R2P27930 398 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 SERPINB6P35237 376 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 ARCN1P48444 511 aaKnown RBP15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 ZNF165P49910 485 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 RPE65Q16518 533 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 DPYSL2Q16555 572 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 KHDC1Q4VXA5 237 aaKnown RBP15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 DCAF10Q5QP82 559 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 PLEKHA7Q6IQ23 1121 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 ARMC6Q6NXE6 501 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 TRAM1L1Q8N609 369 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 ARRDC2Q8TBH0 407 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 GRHL3Q8TE85 626 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 PPM1MQ96MI6 270 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 NUP85Q9BW27 656 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 FANCEQ9HB96 536 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 ZFYVE1Q9HBF4 777 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 SHOC2Q9UQ13 582 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 CSAG2Q9Y5P2 127 aa15.87■□□□□ 0.13
CTDNEP1-211ENST00000575783 A0A1B0GUH1 482 aa15.86■□□□□ 0.13
CTDNEP1-211ENST00000575783 OR6C74A6NCV1 312 aa15.86■□□□□ 0.13
CTDNEP1-211ENST00000575783 C9J4A7 227 aa15.86■□□□□ 0.13
CTDNEP1-211ENST00000575783 E2F3O00716 465 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms