RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ARMC6Q6NXE6 501 aa8.81□□□□□ -1
SMG6-218ENST00000575454 IRF2BP2Q7Z5L9 587 aa8.81□□□□□ -1
SMG6-218ENST00000575454 RAB43Q86YS6 212 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.81□□□□□ -1
SMG6-218ENST00000575454 BEND7Q8N7W2 519 aaPredicted RBP8.81□□□□□ -1
SMG6-218ENST00000575454 ENDOVQ8N8Q3 282 aaKnown RBP8.81□□□□□ -1
SMG6-218ENST00000575454 BRSK1Q8TDC3 778 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ZFPM2Q8WW38 1151 aa8.81□□□□□ -1
SMG6-218ENST00000575454 C19orf60Q96EN9 201 aa8.81□□□□□ -1
SMG6-218ENST00000575454 FER1L6-AS2Q96M78 137 aa8.81□□□□□ -1
SMG6-218ENST00000575454 TTC25Q96NG3 672 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ERGIC2Q96RQ1 377 aa8.81□□□□□ -1
SMG6-218ENST00000575454 RUFY1Q96T51 708 aa8.81□□□□□ -1
SMG6-218ENST00000575454 C17orf62Q9BQA9 187 aa8.81□□□□□ -1
SMG6-218ENST00000575454 DPH2Q9BQC3 489 aaPredicted RBP8.81□□□□□ -1
SMG6-218ENST00000575454 SYT11Q9BT88 431 aa8.81□□□□□ -1
SMG6-218ENST00000575454 NUP85Q9BW27 656 aa8.81□□□□□ -1
SMG6-218ENST00000575454 TRIM7Q9C029 511 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ILKAPQ9H0C8 392 aaPredicted RBP8.81□□□□□ -1
SMG6-218ENST00000575454 CHST8Q9H2A9 424 aa8.81□□□□□ -1
SMG6-218ENST00000575454 SYTL2Q9HCH5 934 aa8.81□□□□□ -1
SMG6-218ENST00000575454 MAGEE1Q9HCI5 957 aa8.81□□□□□ -1
SMG6-218ENST00000575454 PCDH18Q9HCL0 1135 aa8.81□□□□□ -1
SMG6-218ENST00000575454 AGPAT4Q9NRZ5 378 aa8.81□□□□□ -1
SMG6-218ENST00000575454 LUZP4Q9P127 313 aa8.81□□□□□ -1
SMG6-218ENST00000575454 LIMA1Q9UHB6 759 aaKnown RBP8.81□□□□□ -1
SMG6-218ENST00000575454 ENTPD4Q9Y227 616 aa8.81□□□□□ -1
SMG6-218ENST00000575454 PADI2Q9Y2J8 665 aa8.81□□□□□ -1
SMG6-218ENST00000575454 COPG1Q9Y678 874 aaKnown RBP8.81□□□□□ -1
SMG6-218ENST00000575454 FBN3Q75N90 2809 aa8.81□□□□□ -1
SMG6-218ENST00000575454 HIVEP1P15822 2718 aa8.81□□□□□ -1
SMG6-218ENST00000575454 CD63P08962 238 aa8.8□□□□□ -1
SMG6-218ENST00000575454 IL4RP24394 825 aa8.8□□□□□ -1
SMG6-218ENST00000575454 GPS2Q13227 327 aa8.8□□□□□ -1
SMG6-218ENST00000575454 PLEKHN1Q494U1 663 aaPredicted RBP8.8□□□□□ -1
SMG6-218ENST00000575454 PLEKHS1Q5SXH7 462 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ZFYVE27Q5T4F4 411 aa8.8□□□□□ -1
SMG6-218ENST00000575454 CCDC183Q5T5S1 534 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ZNF648Q5T619 568 aaPredicted RBP8.8□□□□□ -1
SMG6-218ENST00000575454 ZDHHC20Q5W0Z9 365 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ALS2CLQ60I27 953 aa8.8□□□□□ -1
SMG6-218ENST00000575454 CCDC70Q6NSX1 233 aa8.8□□□□□ -1
SMG6-218ENST00000575454 IGFL3Q6UXB1 125 aa8.8□□□□□ -1
SMG6-218ENST00000575454 AMZ2Q86W34 360 aa8.8□□□□□ -1
SMG6-218ENST00000575454 OOSP2Q86WS3 158 aa8.8□□□□□ -1
SMG6-218ENST00000575454 TRAPPC5Q8IUR0 188 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ZNF547Q8IVP9 402 aa8.8□□□□□ -1
SMG6-218ENST00000575454 CISD2Q8N5K1 135 aaKnown RBP8.8□□□□□ -1
SMG6-218ENST00000575454 CLEC1AQ8NC01 280 aa8.8□□□□□ -1
SMG6-218ENST00000575454 MARVELD3Q96A59 401 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ZNF653Q96CK0 615 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ZNF501Q96CX3 271 aaPredicted RBP8.8□□□□□ -1
SMG6-218ENST00000575454 VPS35Q96QK1 796 aa8.8□□□□□ -1
SMG6-218ENST00000575454 MAP3K3Q99759 626 aa8.8□□□□□ -1
SMG6-218ENST00000575454 DHRS4Q9BTZ2 278 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ZCCHC2Q9C0B9 1178 aaKnown RBP8.8□□□□□ -1
SMG6-218ENST00000575454 NUP62CLQ9H1M0 184 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ARFGAP3Q9NP61 516 aa8.8□□□□□ -1
SMG6-218ENST00000575454 ASF1BQ9NVP2 202 aa8.8□□□□□ -1
SMG6-218ENST00000575454 FANCLQ9NW38 375 aa8.8□□□□□ -1
SMG6-218ENST00000575454 HRASLS2Q9NWW9 162 aa8.8□□□□□ -1
SMG6-218ENST00000575454 TRIM10Q9UDY6 481 aa8.8□□□□□ -1
SMG6-218ENST00000575454 DNMT3AQ9Y6K1 912 aaPredicted RBP8.8□□□□□ -1
SMG6-218ENST00000575454 DOCK4Q8N1I0 1966 aa8.8□□□□□ -1
SMG6-218ENST00000575454 HEATR9A2RTY3 570 aa8.79□□□□□ -1
SMG6-218ENST00000575454 KLHL33A6NCF5 533 aa8.79□□□□□ -1
SMG6-218ENST00000575454 OR5K3A6NET4 321 aa8.79□□□□□ -1
SMG6-218ENST00000575454 C9J4A7 227 aa8.79□□□□□ -1
SMG6-218ENST00000575454 PEX12O00623 359 aa8.79□□□□□ -1
SMG6-218ENST00000575454 HBQ1P09105 142 aa8.79□□□□□ -1
SMG6-218ENST00000575454 POU3F2P20265 443 aaPredicted RBP8.79□□□□□ -1
SMG6-218ENST00000575454 CDK11BP21127 795 aaKnown RBP8.79□□□□□ -1
SMG6-218ENST00000575454 AGXTP21549 392 aa8.79□□□□□ -1
SMG6-218ENST00000575454 HADHAP40939 763 aa8.79□□□□□ -1
SMG6-218ENST00000575454 CD86P42081 329 aa8.79□□□□□ -1
SMG6-218ENST00000575454 CDK18Q07002 472 aa8.79□□□□□ -1
SMG6-218ENST00000575454 DMPKQ09013 629 aa8.79□□□□□ -1
SMG6-218ENST00000575454 NIPAL4Q0D2K0 466 aa8.79□□□□□ -1
SMG6-218ENST00000575454 TMEM115Q12893 351 aaPredicted RBP8.79□□□□□ -1
SMG6-218ENST00000575454 IHHQ14623 411 aa8.79□□□□□ -1
SMG6-218ENST00000575454 PAFAH1B3Q15102 231 aaKnown RBP8.79□□□□□ -1
SMG6-218ENST00000575454 RPE65Q16518 533 aa8.79□□□□□ -1
SMG6-218ENST00000575454 KYNUQ16719 465 aa8.79□□□□□ -1
SMG6-218ENST00000575454 HADHQ16836 314 aaKnown RBP8.79□□□□□ -1
SMG6-218ENST00000575454 TMC3Q7Z5M5 1100 aa8.79□□□□□ -1
SMG6-218ENST00000575454 MAP7D3Q8IWC1 876 aa8.79□□□□□ -1
SMG6-218ENST00000575454 DSELQ8IZU8 1212 aa8.79□□□□□ -1
SMG6-218ENST00000575454 ZADH2Q8N4Q0 377 aa8.79□□□□□ -1
SMG6-218ENST00000575454 ZBTB2Q8N680 514 aa8.79□□□□□ -1
SMG6-218ENST00000575454 NIPA2Q8N8Q9 360 aa8.79□□□□□ -1
SMG6-218ENST00000575454 CCNYQ8ND76 341 aa8.79□□□□□ -1
SMG6-218ENST00000575454 ST6GALNAC3Q8NDV1 305 aa8.79□□□□□ -1
SMG6-218ENST00000575454 GPR26Q8NDV2 337 aa8.79□□□□□ -1
SMG6-218ENST00000575454 GDAP1Q8TB36 358 aa8.79□□□□□ -1
SMG6-218ENST00000575454 DTX3LQ8TDB6 740 aa8.79□□□□□ -1
SMG6-218ENST00000575454 COG1Q8WTW3 980 aa8.79□□□□□ -1
SMG6-218ENST00000575454 CLIP3Q96DZ5 547 aa8.79□□□□□ -1
SMG6-218ENST00000575454 ZNF830Q96NB3 372 aaPredicted RBP8.79□□□□□ -1
SMG6-218ENST00000575454 BARD1Q99728 777 aaKnown RBP8.79□□□□□ -1
SMG6-218ENST00000575454 GPR63Q9BZJ6 419 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms