RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 SERPINA9Q86WD7 417 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 CCDC25Q86WR0 208 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 GALNT13Q8IUC8 556 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 ANKMY2Q8IV38 441 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 IFT20Q8IY31 132 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 RBFAQ8N0V3 343 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 AGGF1Q8N302 714 aaeCLIP16.42■□□□□ 0.22
TMEM88-202ENST00000574668 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM88-202ENST00000574668 APOLD1Q96LR9 279 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 COPS8Q99627 209 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 TCEAL2Q9H3H9 227 aaPredicted RBP16.42■□□□□ 0.22
TMEM88-202ENST00000574668 ZDHHC3Q9NYG2 299 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 ZC3H7BQ9UGR2 993 aaKnown RBP16.42■□□□□ 0.22
TMEM88-202ENST00000574668 ZNHIT2Q9UHR6 403 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 KLF15Q9UIH9 416 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 U3KQA8 63 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 KALRNO60229 2985 aa16.42■□□□□ 0.22
TMEM88-202ENST00000574668 TRBV5-4A0A0C4DH59 114 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 GPR89AB7ZAQ6 455 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 E7ESA3 106 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 CD3EAPO15446 510 aaKnown RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 NUAK1O60285 661 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 OPA1O60313 960 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 GPR89BP0CG08 455 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 PRSS56P0CW18 603 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 CKMT1AP12532 417 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 PLA2G2AP14555 144 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 ZNF8P17098 575 aaPredicted RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 ACRV1P26436 265 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 CA5AP35218 305 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 CDKN1CP49918 316 aaPredicted RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 TUBB4BP68371 445 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 C1orf61Q13536 156 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 LONRF1Q17RB8 773 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 PRRT3Q5FWE3 981 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 MRNIPQ6NTE8 343 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 CERS6Q6ZMG9 384 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 CEP128Q6ZU80 1094 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 MICALCLQ6ZW33 695 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 SDCCAG8Q86SQ7 713 aaPredicted RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 TMEM135Q86UB9 458 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 ZBED8Q8IZ13 594 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 FSTL5Q8N475 847 aaPredicted RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 FBXO36Q8NEA4 188 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 PYROXD1Q8WU10 500 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 OR2M4Q96R27 311 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 TRIM56Q9BRZ2 755 aaKnown RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 C20orf96Q9NUD7 363 aaPredicted RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 PNMA8BQ9ULN7 279 aaPredicted RBP16.41■□□□□ 0.22
TMEM88-202ENST00000574668 DOLKQ9UPQ8 538 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 TEX264Q9Y6I9 313 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 FAM169AQ9Y6X4 670 aa16.41■□□□□ 0.22
TMEM88-202ENST00000574668 TEX51A0A1B0GUA7 166 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 NEMP2A6NFY4 417 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 AGAP14A8MT82 685 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 BHMG1C9JSJ3 638 aaPredicted RBP16.4■□□□□ 0.22
TMEM88-202ENST00000574668 PFDN6O15212 129 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 AQP9O43315 295 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 GRID2O43424 1007 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 DNAJC6O75061 913 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 GABREP78334 506 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 CUL1Q13616 776 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 ITIH4Q14624 930 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 CRYMQ14894 314 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 ELOCQ15369 112 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 TCEA2Q15560 299 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 DBN1Q16643 649 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 KHDC1Q4VXA5 237 aaKnown RBP16.4■□□□□ 0.22
TMEM88-202ENST00000574668 PYCR3Q53H96 274 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 KCTD16Q68DU8 428 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 CRTC3Q6UUV7 619 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 LRRTM4Q86VH4 590 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 IGDCC3Q8IVU1 814 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 PALM2Q8IXS6 379 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 PIANPQ8IYJ0 282 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 ZNF548Q8NEK5 533 aaPredicted RBP16.4■□□□□ 0.22
TMEM88-202ENST00000574668 GABPB2Q8TAK5 448 aaPredicted RBP16.4■□□□□ 0.22
TMEM88-202ENST00000574668 SCARF2Q96GP6 870 aaPredicted RBP16.4■□□□□ 0.22
TMEM88-202ENST00000574668 TMEM168Q9H0V1 697 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 CPNE5Q9HCH3 593 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 PTPRQQ9UMZ3 2332 aa16.4■□□□□ 0.22
TMEM88-202ENST00000574668 HELZ2Q9BYK8 2649 aaKnown RBP16.39■□□□□ 0.21
TMEM88-202ENST00000574668 SETXQ7Z333 2677 aaKnown RBP16.39■□□□□ 0.21
TMEM88-202ENST00000574668 ZCWPW2A0A1B0GU75 182 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 GOLGA8KD6RF30 607 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 GOLGA8TH3BQL2 631 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 CSO75390 466 aaKnown RBP16.39■□□□□ 0.21
TMEM88-202ENST00000574668 NDUFS3O75489 264 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 FUCA1P04066 466 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 ANXA6P08133 673 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 PCBP4P57723 403 aaKnown RBP16.39■□□□□ 0.21
TMEM88-202ENST00000574668 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.21
TMEM88-202ENST00000574668 NEPROQ6NW34 567 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 TMEM220Q6QAJ8 160 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 UNC5AQ6ZN44 842 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 DET1Q7L5Y6 550 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 TAF8Q7Z7C8 310 aa16.39■□□□□ 0.21
TMEM88-202ENST00000574668 ZNF605Q86T29 641 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms