RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ING2Q9H160 280 aa18.84■□□□□ 0.61
SCARF1-206ENST00000573852 CARS2Q9HA77 564 aaKnown RBP18.84■□□□□ 0.61
SCARF1-206ENST00000573852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCARF1-206ENST00000573852 NOL3O60936 208 aaKnown RBP18.83■□□□□ 0.61
SCARF1-206ENST00000573852 DEAF1O75398 565 aaPredicted RBP18.83■□□□□ 0.61
SCARF1-206ENST00000573852 THRBP10828 461 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 G6PDP11413 515 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 TMBIM6P55061 237 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 TGFBIQ15582 683 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 GLT6D1Q7Z4J2 308 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 ZNF280BQ86YH2 543 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 CLEC4FQ8N1N0 589 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 FAM86B1Q8N7N1 296 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 BPIFB6Q8NFQ5 453 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 ITFG1Q8TB96 612 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 LINGO1Q96FE5 620 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 COX4I2Q96KJ9 171 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 GLT1D1Q96MS3 346 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 LHPPQ9H008 270 aa18.83■□□□□ 0.61
SCARF1-206ENST00000573852 SCN10AQ9Y5Y9 1956 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 J3QRK9 145 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 PKMP14618 531 aaKnown RBP18.83■□□□□ 0.6
SCARF1-206ENST00000573852 CTSL3PQ5NE16 218 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 BROXQ5VW32 411 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 ALG1LQ6GMV1 187 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 DCDC5Q6ZRR9 648 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 ATAD1Q8NBU5 361 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 SLC22A17Q8WUG5 538 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 FBXL8Q96CD0 374 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 EXOC2Q96KP1 924 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 CSF3RQ99062 836 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 CGREF1Q99674 301 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 PFDN4Q9NQP4 134 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 NEUROG3Q9Y4Z2 214 aa18.83■□□□□ 0.6
SCARF1-206ENST00000573852 GREB1Q4ZG55 1949 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 CBFA2T3O75081 653 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 TULP3O75386 442 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 VPS26AO75436 327 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 RAP2AP10114 183 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 HOXD9P28356 352 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-206ENST00000573852 IST1P53990 364 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 C18orf21Q32NC0 220 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-206ENST00000573852 DDHD1Q8NEL9 900 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 OR7D4Q8NG98 312 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 FBXO32Q969P5 355 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 B3GALT6Q96L58 329 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 ZNF382Q96SR6 550 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 ADNPQ9H2P0 1102 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 HEBP1Q9NRV9 189 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 TRMT6Q9UJA5 497 aaKnown RBP18.82■□□□□ 0.6
SCARF1-206ENST00000573852 FNDC3AQ9Y2H6 1198 aaKnown RBP18.82■□□□□ 0.6
SCARF1-206ENST00000573852 SH3GLB1Q9Y371 365 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 CORINQ9Y5Q5 1042 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 ANXA6P08133 673 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 IL7RP16871 459 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 PAX3P23760 479 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 NFKBIAP25963 317 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 MTHFRP42898 656 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 MAPKAPK2P49137 400 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 SPRYD7Q5W111 196 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 R3HCC1LQ7Z5L2 792 aaKnown RBP18.82■□□□□ 0.6
SCARF1-206ENST00000573852 SLC15A4Q8N697 577 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 CD200R1Q8TD46 325 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 MGME1Q9BQP7 344 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 TOR3AQ9H497 397 aa18.82■□□□□ 0.6
SCARF1-206ENST00000573852 MOXD2PA6NHM9 499 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 ABCB7O75027 752 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 IGLV3-27P01718 113 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 CAPN1P07384 714 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 GGT1P19440 569 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 CRHBPP24387 322 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 ARL1P40616 181 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-206ENST00000573852 IL2P60568 153 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 PTPRRQ15256 657 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 TAF1AQ15573 450 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-206ENST00000573852 FAM98BQ52LJ0 330 aaKnown RBP18.81■□□□□ 0.6
SCARF1-206ENST00000573852 C16orf87Q6PH81 154 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 CYP20A1Q6UW02 462 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 IL27RAQ6UWB1 636 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 THAP5Q7Z6K1 395 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 ZNF583Q96ND8 569 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 SMURF2Q9HAU4 748 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 ARNTLO00327 626 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 ANKRD28O15084 1053 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 OAZ2O95190 189 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 PRLP01236 227 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 TACR2P21452 398 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 MLLT10P55197 1068 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 CHRNB3Q05901 458 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 NKG7Q16617 165 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 FAM126BQ8IXS8 530 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 METTL6Q8TCB7 284 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 SARS2Q9NP81 518 aaKnown RBP18.81■□□□□ 0.6
SCARF1-206ENST00000573852 TMEM45AQ9NWC5 275 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 IL37Q9NZH6 218 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 FKBPLQ9UIM3 349 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 ST14Q9Y5Y6 855 aa18.81■□□□□ 0.6
SCARF1-206ENST00000573852 IQCA1LA6NCM1 817 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 GRXCR2A6NFK2 248 aa18.8■□□□□ 0.6
SCARF1-206ENST00000573852 KCNH1O95259 989 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms