RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 ASTE1Q2TB18 679 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 FIGNQ5HY92 759 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 ANKS6Q68DC2 871 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 CRTC3Q6UUV7 619 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 CHST15Q7LFX5 561 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 BMPERQ8N8U9 685 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 LSM14AQ8ND56 463 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 GPR26Q8NDV2 337 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 KIAA1524Q8TCG1 905 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 GRAMD1AQ96CP6 724 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 TBC1D10AQ9BXI6 508 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 XPO4Q9C0E2 1151 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 POLR1EQ9GZS1 481 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 SPTLC3Q9NUV7 552 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 TRNAU1APQ9NX07 287 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 CTTNBP2NLQ9P2B4 639 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 SAE1Q9UBE0 346 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 IP6K2Q9UHH9 426 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 TMPRSS11EQ9UL52 423 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 CAPN11Q9UMQ6 739 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 SHOC2Q9UQ13 582 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 SPO11Q9Y5K1 396 aa9.13□□□□□ -0.95
NPLOC4-210ENST00000572824 MED13Q9UHV7 2174 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 B8ZZF3 427 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 PSMD11O00231 422 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 MATN3O15232 486 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SNRNP200O75643 2136 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 ASMTLO95671 621 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 TNNT1P13805 278 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 UGT1A3P35503 534 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 MARCKSL1P49006 195 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 LIMK2P53671 638 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 EPHB1P54762 984 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 PPP1CAP62136 330 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 DYNLT1P63172 113 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 ZBED6P86452 979 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 DPTQ07507 201 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 ADCY2Q08462 1091 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 EIF3IQ13347 325 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 MESDQ14696 234 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SEPT7Q16181 437 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 MANEAQ5SRI9 462 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 HENMT1Q5T8I9 393 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 PPP1R2P3Q6NXS1 205 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 TIPARPQ7Z3E1 657 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 PIM3Q86V86 326 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 FAM129CQ86XR2 697 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 GALNT13Q8IUC8 556 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SFRP1Q8N474 314 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SPATA22Q8NHS9 363 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 NKD1Q969G9 470 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 UTP4Q969X6 686 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SGF29Q96ES7 293 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 TRIB3Q96RU7 358 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 CHP1Q99653 195 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 CMKLR1Q99788 373 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 ZNF670Q9BS34 389 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SLC12A9Q9BXP2 914 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 PCDH9Q9HC56 1237 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 PRDM8Q9NQV8 689 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 OGFRQ9NZT2 677 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SEPT10Q9P0V9 454 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 SLC23A2Q9UGH3 650 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 ZNHIT2Q9UHR6 403 aa9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 MRPS18BQ9Y676 258 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-210ENST00000572824 FER1L5A0AVI2 2057 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 LOC101059948A0A1B0GTJ6 334 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 LRRD1A4D1F6 860 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 MYO1FO00160 1098 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 FANCGO15287 622 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 MT-CYBP00156 380 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 PECAM1P16284 738 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 ZNF28P17035 718 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 ZNF8P17098 575 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 KDELR1P24390 212 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 TEAD1P28347 426 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 NTF4P34130 210 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 SPINT3P49223 89 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 ZNF135P52742 658 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 OLIG2Q13516 323 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 ZBTB37Q5TC79 503 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 CDPF1Q6NVV7 123 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 CCDC13Q8IYE1 715 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 CCNYQ8ND76 341 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 OR6C4Q8NGE1 309 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 NSMCE1Q8WV22 266 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 SYN2Q92777 582 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 AGAP3Q96P47 875 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 NRTNQ99748 197 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 HERPUD2Q9BSE4 406 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 OR2AG1Q9H205 316 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 DONSONQ9NYP3 566 aa9.11□□□□□ -0.95
NPLOC4-210ENST00000572824 ATXN10Q9UBB4 475 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms