RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 NXPE2Q96DL1 559 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 LINC00615Q96LM1 132 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 PPP1R2P1Q96PQ5 205 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 TRIM56Q9BRZ2 755 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 LRRN3Q9H3W5 708 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 DPEP2Q9H4A9 486 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 SARS2Q9NP81 518 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 PRDM8Q9NQV8 689 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 TREX1Q9NSU2 369 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 TRMT1Q9NXH9 659 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 PDP2Q9P2J9 529 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 LRIT1Q9P2V4 623 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 MOSPD1Q9UJG1 213 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 RIMKLBQ9ULI2 386 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 PCDHB11Q9Y5F2 797 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 CCDC162PA2VCL2 907 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 STX7O15400 261 aaKnown RBP8.53□□□□□ -1.04
SMG6-210ENST00000572205 KRT37O76014 449 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 ASMTLO95671 621 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 IFNB1P01574 187 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 MPOP05164 745 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 THRAP10827 490 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 TPSB2P20231 275 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 ACRV1P26436 265 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 IVDP26440 423 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 MC4RP32245 332 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 ETV5P41161 510 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 SLC19A1P41440 591 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 RPIAP49247 311 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 OR1D5P58170 312 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 CDH17Q12864 832 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 ITGA9Q13797 1035 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 NFE2L1Q14494 772 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 CLCA4Q14CN2 919 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 TPSAB1Q15661 275 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 LDLRAP1Q5SW96 308 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 PAPD7Q5XG87 772 aaKnown RBP8.53□□□□□ -1.04
SMG6-210ENST00000572205 ABRAXAS1Q6UWZ7 409 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 WASH2PQ6VEQ5 465 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 CLEC14AQ86T13 490 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 CAND1Q86VP6 1230 aaKnown RBP8.53□□□□□ -1.04
SMG6-210ENST00000572205 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 C17orf53Q8N3J3 647 aaPredicted RBP8.53□□□□□ -1.04
SMG6-210ENST00000572205 BMPERQ8N8U9 685 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 OR6C4Q8NGE1 309 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 ZNF398Q8TD17 642 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 CPT1BQ92523 772 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 CDKN2AIPNLQ96HQ2 116 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 RMDN2Q96LZ7 410 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 DEPDC7Q96QD5 511 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 WDR83Q9BRX9 315 aaKnown RBP8.53□□□□□ -1.04
SMG6-210ENST00000572205 AP1M1Q9BXS5 423 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 FOXP3Q9BZS1 431 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 SEMA6CQ9H3T2 930 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 PLAC1Q9HBJ0 212 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 WASH6PQ9NQA3 447 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 PAK5Q9P286 719 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 MARCH4Q9P2E8 410 aaPredicted RBP8.53□□□□□ -1.04
SMG6-210ENST00000572205 ZNHIT2Q9UHR6 403 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 SATB2Q9UPW6 733 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 ZNF148Q9UQR1 794 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 RAXQ9Y2V3 346 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 PKP3Q9Y446 797 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 TCAF1Q9Y4C2 921 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 PRSS21Q9Y6M0 314 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMG6-210ENST00000572205 SLC30A1Q9Y6M5 507 aa8.53□□□□□ -1.04
SMG6-210ENST00000572205 A0A087WV48 116 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 IGHV5-10-1A0A0J9YXX1 117 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 CCDC78A2IDD5 438 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 LILRA5A6NI73 299 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 OR2AG2A6NM03 316 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 OR52A4PA6NMU1 304 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 C2orf81A6NN90 581 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 ESPNB1AK53 854 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PGRMC1O00264 195 aaKnown RBP8.52□□□□□ -1.05
SMG6-210ENST00000572205 KMOO15229 486 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PHF2O75151 1096 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 CDK14O94921 469 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 CRTAMO95727 393 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 JUPP14923 745 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 COILP38432 576 aaPredicted RBP8.52□□□□□ -1.05
SMG6-210ENST00000572205 PTGIRP43119 386 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 GPR3P46089 330 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 LSSP48449 732 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PPP1CAP62136 330 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 CRADDP78560 199 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 LSM11P83369 360 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMG6-210ENST00000572205 TMPRSS15P98073 1019 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SPIDRQ14159 915 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PRPSAP1Q14558 356 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 LONRF2Q1L5Z9 754 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 TBC1D25Q3MII6 688 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 HS1BP3Q53T59 392 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms