RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 HEATR9A2RTY3 570 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TMEM202A6NGA9 273 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 AP3B1O00203 1094 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 YY2O15391 372 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ZNF500O60304 480 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 MTX2O75431 263 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 SOD1P00441 154 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 MYCLP1P12525 358 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 IVDP26440 423 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 CCKBRP32239 447 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 MAGEA6P43360 314 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 POLD2P49005 469 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 MAPK10P53779 464 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 CDK3Q00526 305 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 PPARDQ03181 441 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 DPTQ07507 201 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 EIF2B5Q13144 721 aaKnown RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ZRANB3Q5FWF4 1079 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 PCID2Q5JVF3 399 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 HP1BP3Q5SSJ5 553 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TSTD2Q5T7W7 516 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TMEM164Q5U3C3 297 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 CAND1Q86VP6 1230 aaKnown RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ZFAND4Q86XD8 727 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TRAM1L1Q8N609 369 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 KYQ8NBH2 561 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 NOA1Q8NC60 698 aaKnown RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 OR56A4Q8NGH8 313 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ZNF398Q8TD17 642 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 STYXQ8WUJ0 223 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TMEM159Q96B96 161 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TBATAQ96M53 351 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ZNF778Q96MU6 729 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 WDR92Q96MX6 357 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 CMKLR1Q99788 373 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ERP44Q9BS26 406 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TEX101Q9BY14 249 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TCEAL2Q9H3H9 227 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 KLQ9UEF7 1012 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 UTP11Q9Y3A2 253 aaKnown RBP13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TCAF1Q9Y4C2 921 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 SLC30A1Q9Y6M5 507 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 TLN1Q9Y490 2541 aaKnown RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 UNC79Q9P2D8 2635 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 BLACEA4D250 179 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 OR51F1A6NGY5 319 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 BANF1O75531 89 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 RASGRP1O95267 797 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 PRAMEF1O95521 474 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 PRSS56P0CW18 603 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CTSEP14091 401 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ITIH1P19827 911 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CD82P27701 267 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 NMBRP28336 390 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 MC4RP32245 332 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CA5AP35218 305 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 TRIM23P36406 574 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 HADHAP40939 763 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CASRP41180 1078 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ATP1A2P50993 1020 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 BLKP51451 505 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ARSDP51689 593 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 POLE2P56282 527 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 KIAA1024LP59773 190 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 DCDC1P59894 354 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 SRP54P61011 504 aaKnown RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CCL7P80098 99 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CALCOCO2Q13137 446 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 LAMB3Q13751 1172 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ELOCQ15369 112 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ZDHHC20Q5W0Z9 365 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ADAMTSL4Q6UY14 1074 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 MACC1Q6ZN28 852 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 FSTL5Q8N475 847 aaPredicted RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 MCUQ8NE86 351 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 OR6P1Q8NGX9 317 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 OR1E3Q8WZA6 343 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 HDAC10Q969S8 669 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 SERPINB12Q96P63 405 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 TRIM56Q9BRZ2 755 aaKnown RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ZSCAN5AQ9BUG6 496 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CDH19Q9H159 772 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 ASB8Q9H765 288 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms