RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NAGPAQ9UK23 515 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 NOCTQ9UK39 431 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 ADAM21Q9UKJ8 722 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF148Q9UQR1 794 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GINS2Q9Y248 185 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 COQ4Q9Y3A0 265 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 HYOU1Q9Y4L1 999 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 STON1Q9Y6Q2 735 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CHD5Q8TDI0 1954 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 GOLGA8QA0A0J9YX86 632 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 A0A1B0GTQ1 180 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TRBC2A0A5B9 178 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CLCA1A8K7I4 914 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 FCHO1O14526 889 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TSPAN4O14817 238 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 XPO1O14980 1071 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC16A6O15403 523 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 LRRTM2O43300 516 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 HCRTO43612 131 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TRAPPC3O43617 180 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TLX2O43763 284 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 GAS2O43903 313 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 GPR32O75388 356 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TOM1L1O75674 476 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CDC123O75794 336 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 RBBP9O75884 186 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 DXOO77932 396 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 RHOBTB1O94844 696 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CDK14O94921 469 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PTBP3O95758 552 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 CHEK2O96017 543 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ADH1CP00326 375 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MT-ATP6P00846 226 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 AGTP01019 485 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 APOA1P02647 267 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TP53P04637 393 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 CYP1A1P04798 512 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 SNRPB2P08579 225 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 SERPINF2P08697 491 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 KITP10721 976 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 UROSP10746 265 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 UMPSP11172 480 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CYP2C9P11712 490 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PKMP14618 531 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 TYRP14679 529 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CYP11B1P15538 503 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 DDX5P17844 614 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 CYP2A7P20853 494 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ACO1P21399 889 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 IGFBP6P24592 240 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 ADRA1DP25100 572 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PSMA2P25787 234 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CD1BP29016 333 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TKTP29401 623 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 CDC25CP30307 473 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MAT2AP31153 395 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 GBP1P32455 592 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ADCY8P40145 1251 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MAGEA9P43362 315 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CCR10P46092 362 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 FASLGP48023 281 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC11A1P49279 550 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC26A2P50443 739 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ARSEP51690 589 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 THOP1P52888 689 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CAPZA1P52907 286 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 EPHB4P54760 987 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CDH8P55286 799 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SNU13P55769 128 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 HNRNPH2P55795 449 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 OXCT1P55809 520 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SUMO3P55854 103 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 BCAR1P56945 870 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 RNF4P78317 190 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ADAM17P78536 824 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 GPLD1P80108 840 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 FAM189BP81408 668 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 HTRA4P83105 476 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 SMAD3P84022 425 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 TFAMQ00059 246 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 FAAP100Q0VG06 881 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SREBF2Q12772 1141 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 IL18Q14116 193 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TFDP1Q14186 410 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CLCA4Q14CN2 919 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ANGPT1Q15389 498 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NAB2Q15742 525 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PCSK7Q16549 785 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 FSCN1Q16658 493 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 DECR1Q16698 335 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 HYAL4Q2M3T9 481 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NKAIN1Q4KMZ8 207 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 INTS6LQ5JSJ4 861 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 PLAC9Q5JTB6 97 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 COLEC12Q5KU26 742 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 RTP2Q5QGT7 225 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 BEND6Q5SZJ8 279 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 THEM4Q5T1C6 240 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 DAB2IPQ5VWQ8 1189 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MBNL2Q5VZF2 373 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms