RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 RASGEF1AQ8N9B8 481 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 IPMKQ8NFU5 416 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 BLOC1S5Q8TDH9 187 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 CT55Q8WUE5 264 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 KLHL6Q8WZ60 621 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZDHHC12Q96GR4 267 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 TEKT5Q96M29 485 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 MAP3K3Q99759 626 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 GOLPH3Q9H4A6 298 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 C10orf88Q9H8K7 445 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 IMP3Q9NV31 184 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 ANKMY1Q9P2S6 941 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 NFKBIL1Q9UBC1 381 aaPredicted RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM153AQ9UHL3 310 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 TLK1Q9UKI8 766 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 PADI1Q9ULC6 663 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNF106Q9H2Y7 1883 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 TNRC6AQ8NDV7 1962 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 USP9YO00507 2555 aaPredicted RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 USP9XQ93008 2570 aaPredicted RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 RELNP78509 3460 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 MKRN2OSH3BPM6 223 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 TOX3O15405 576 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 SPOPO43791 374 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 CST8O60676 142 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 PDGFAP04085 211 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 EBLN1P0CF75 366 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 FGF5P12034 268 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZFXP17010 805 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 VCLP18206 1134 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 NELFEP18615 380 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 COMTP21964 271 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 HMGCLP35914 325 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 HALP42357 657 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 ARL4DP49703 201 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 KLRB1Q12918 225 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 CHAF1BQ13112 559 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 TUBB3Q13509 450 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 PRKD1Q15139 912 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 RPE65Q16518 533 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 FNBP1LQ5T0N5 605 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 GPRC6AQ5T6X5 926 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 AGAP9Q5VTM2 703 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 PWWP2BQ6NUJ5 590 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 TMEM220Q6QAJ8 160 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 KDELC1Q6UW63 502 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 WASH2PQ6VEQ5 465 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 ASB18Q6ZVZ8 466 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 MICALCLQ6ZW33 695 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 PID1Q7Z2X4 250 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 GLT6D1Q7Z4J2 308 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 PRSS42Q7Z5A4 293 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 RHOT1Q8IXI2 618 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 TEX19Q8NA77 164 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 SIDT2Q8NBJ9 832 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 TFB1MQ8WVM0 346 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 OXNAD1Q96HP4 312 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 CCDC42Q96M95 316 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 PPM1MQ96MI6 270 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 VPS35Q96QK1 796 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 DNAJC7Q99615 494 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 TRIM55Q9BYV6 548 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 NHEJ1Q9H9Q4 299 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 LHX9Q9NQ69 397 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 WASH6PQ9NQA3 447 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNHIT6Q9NWK9 470 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 KLHL8Q9P2G9 620 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 LCMT1Q9UIC8 334 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 RARRES3Q9UL19 164 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 POLHQ9Y253 713 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 MAN2B2Q9Y2E5 1009 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 KCTD3Q9Y597 815 aa8.43□□□□□ -1.06
CTDNEP1-203ENST00000570385 GLYATL1P3A0A0U1RQE8 302 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 LOC285095A0A1B0GVY8 99 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 SSU72P8A0A1W2PR75 194 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 UBA6A0AVT1 1052 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNF487B1APH4 448 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 CREG1O75629 220 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 RFPL1O75677 317 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 POLBP06746 335 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 TPM3P06753 285 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ATXN8OSP0DMR3 200 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 FECHP22830 423 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 AKT1P31749 480 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 SPAM1P38567 509 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ARHGAP25P42331 645 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 CDKN2BP42772 138 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 TNNT3P45378 269 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 MARCKSL1P49006 195 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 XRCC4Q13426 336 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 OLIG2Q13516 323 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 GPR19Q15760 415 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 DNTTIP2Q5QJE6 756 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 LRRC38Q5VT99 294 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM69BQ5VUD6 431 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 CPZQ66K79 652 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 SPOCD1Q6ZMY3 1216 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms