RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 HES6Q96HZ4 224 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 HSFY1Q96LI6 401 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 C5orf34Q96MH7 638 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 HNRNPABQ99729 332 aaKnown RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 NPAS1Q99742 590 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 MRPL45Q9BRJ2 306 aaKnown RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 C11orf70Q9BRQ4 267 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 TRIM62Q9BVG3 475 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 DPCDQ9BVM2 203 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 TPSD1Q9BZJ3 242 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 UBXN6Q9BZV1 441 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 CARD9Q9H257 536 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 CXCL16Q9H2A7 254 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 GLOD4Q9HC38 313 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ACP6Q9NPH0 428 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 TBC1D13Q9NVG8 400 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ZDHHC7Q9NXF8 308 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ANAPC7Q9UJX3 599 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 SLC12A4Q9UP95 1085 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 SF3B1O75533 1304 aaKnown RBP eCLIP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 PATJQ8NI35 1801 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 PCNTO95613 3336 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FNDC1Q4ZHG4 1894 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CENPFP49454 3210 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 SCN5AQ14524 2016 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CTAGE15A4D2H0 777 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CASTOR2A6NHX0 329 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FAM90A7PA6NKC0 464 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FAM90A22PA8MWA6 464 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FAM90A12PA8MX19 464 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FAM90A23PA8MXZ1 464 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 MASP2O00187 686 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 XPO1O14980 1071 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 PSTPIP1O43586 416 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 SPOPO43791 374 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 SEC14L2O76054 403 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 METTL18O95568 372 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 ERBB2P04626 1255 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 ATP1A1P05023 1023 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FAM200BP0CF97 657 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CTAGE8P0CG41 777 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 NR2F1P10589 423 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 GLULP15104 373 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CTNNA2P26232 953 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CYP2C18P33260 490 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CTNNA1P35221 906 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CETN2P41208 172 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 RPL34P49207 117 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 IRAK1P51617 712 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 AFF3P51826 1226 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CCL23P55773 120 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 EIF3BP55884 814 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 YWHAHQ04917 246 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 PPIGQ13427 754 aaKnown RBP eCLIP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 NAA25Q14CX7 972 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 RASA2Q15283 850 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 LRRC26Q2I0M4 334 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 GOLGA7BQ2TAP0 167 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 DCUN1D2Q6PH85 259 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 ACOT1Q86TX2 421 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CTAGE6Q86UF2 777 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 NT5DC3Q86UY8 548 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CTAGE4Q8IX94 777 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 DCP1BQ8IZD4 617 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 FEZF2Q8TBJ5 459 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 MYCBPAPQ8TBZ2 947 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 TFAP2BQ92481 460 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 DACT3Q96B18 629 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 ARHGEF26Q96DR7 871 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CNDP2Q96KP4 475 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CEP295NLQ96MC4 621 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CASD1Q96PB1 797 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 SYT15Q9BQS2 421 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 MAK16Q9BXY0 300 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CLPBQ9H078 707 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 SEMA4BQ9NPR2 832 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 MIOSQ9NXC5 875 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 DDX43Q9NXZ2 648 aaKnown RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 MPP6Q9NZW5 540 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 HMGXB4Q9UGU5 601 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 CHORDC1Q9UHD1 332 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 ADAM28Q9UKQ2 775 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 TTC7AQ9ULT0 858 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-222ENST00000570139 TFR2Q9UP52 801 aa7.17□□□□□ -1.26
CNOT1-222ENST00000570139 TCAF2A6NFQ2 919 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM191CA6NGB0 347 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 OR6C75A6NL08 312 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 SIGLEC16A6NMB1 481 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 PGRMC1O00264 195 aaKnown RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 GPR42O15529 346 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TADA2AO75478 443 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 PROSCO94903 275 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 OAZ2O95190 189 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ALDOAP04075 364 aaKnown RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 KRT3P12035 628 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ALADP13716 330 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 MCM3P25205 808 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 APOBEC3AP31941 199 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 MSX2P35548 267 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 OR1G1P47890 313 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms