RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PISDQ9UG56 409 aa12.8□□□□□ -0.36
CNOT1-220ENST00000569916 LHX6Q9UPM6 363 aa12.8□□□□□ -0.36
CNOT1-220ENST00000569916 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
CNOT1-220ENST00000569916 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
CNOT1-220ENST00000569916 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
CNOT1-220ENST00000569916 PIKFYVEQ9Y2I7 2098 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 IGLV3-16A0A075B6K0 115 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PRAMEF33A0A0G2JMD5 474 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 CCDC78A2IDD5 438 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 OR52A4PA6NMU1 304 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 E7EVH7 732 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 HGSO14964 777 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 VIPP01282 170 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 APRTP07741 180 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 JMJD7P0C870 316 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PRSS56P0CW18 603 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 MPSTP25325 297 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PBLDP30039 288 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 KCNJ1P48048 391 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 LMAN1P49257 510 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 CDKN1CP49918 316 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 ARSDP51689 593 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 TRA2AQ13595 282 aaKnown RBP eCLIP12.79□□□□□ -0.363e-8■□□□□ 10.8
CNOT1-220ENST00000569916 NFE2L1Q14494 772 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 GPR33Q49SQ1 333 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 CCDC38Q502W7 563 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 ZRANB3Q5FWF4 1079 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 TMEM71Q6P5X7 295 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 WDR74Q6RFH5 385 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PPP1R21Q6ZMI0 780 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 TMEM26Q6ZUK4 368 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 TRIM48Q8IWZ4 208 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 RASGEF1CQ8N431 466 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 DNAAF3Q8N9W5 541 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 NAF1Q96HR8 494 aaKnown RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PDLIM2Q96JY6 352 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 LINC00615Q96LM1 132 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 COPS8Q99627 209 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 ZMYND15Q9H091 742 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 CASS4Q9NQ75 786 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PDP2Q9P2J9 529 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 PCDHGA7Q9Y5G6 932 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 CHD6Q8TD26 2715 aa12.79□□□□□ -0.36
CNOT1-220ENST00000569916 HEATR9A2RTY3 570 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 MGAT4DA6NG13 374 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 ZSCAN12O43309 604 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 RALBP11234 206 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 ACRV1P26436 265 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 SLC5A2P31639 672 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 HALP42357 657 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 MAPK9P45984 424 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 PRLHRP49683 370 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 TLE3Q04726 772 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 KCTD19Q17RG1 926 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-220ENST00000569916 SERPINA9Q86WD7 417 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 PIANPQ8IYJ0 282 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 SLC35F6Q8N357 371 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 OR13J1Q8NGT2 312 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 GPR150Q8NGU9 434 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 OR2L2Q8NH16 312 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 HEXDCQ8WVB3 486 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 KCNE4Q8WWG9 221 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 DCUN1D1Q96GG9 259 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 PBKQ96KB5 322 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 RANBP9Q96S59 729 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 EPB41L1Q9H4G0 881 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 SLC40A1Q9NP59 571 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 ZDHHC3Q9NYG2 299 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 OGFRQ9NZT2 677 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 RALYQ9UKM9 306 aaKnown RBP12.78□□□□□ -0.36
CNOT1-220ENST00000569916 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
CNOT1-220ENST00000569916 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-220ENST00000569916 NBEAQ8NFP9 2946 aa12.77□□□□□ -0.36
CNOT1-220ENST00000569916 KLHL33A6NCF5 533 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 OR51F1A6NGY5 319 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 CFAP99D6REC4 459 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 NVLO15381 856 aaKnown RBP12.77□□□□□ -0.37
CNOT1-220ENST00000569916 GAS8O95995 478 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 CCL4P13236 92 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 ATP1B2P14415 290 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-220ENST00000569916 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
CNOT1-220ENST00000569916 FOXN2P32314 431 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 PPM1FP49593 454 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-220ENST00000569916 MAPK10P53779 464 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 BASP1P80723 227 aaKnown RBP12.77□□□□□ -0.37
CNOT1-220ENST00000569916 ACVR1Q04771 509 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 CACNG1Q06432 222 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 GPR18Q14330 331 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 DBN1Q16643 649 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 SKIDA1Q1XH10 827 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 TSTD2Q5T7W7 516 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 METRNLQ641Q3 311 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 TTC27Q6P3X3 843 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 C4orf22Q6V702 233 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 PDZD3Q86UT5 571 aa12.77□□□□□ -0.37
CNOT1-220ENST00000569916 JAMLQ86YT9 394 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms