RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PHF19Q5T6S3 580 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 LRRC8BQ6P9F7 803 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF534Q76KX8 674 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF438Q7Z4V0 828 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 LINC00523Q86TU6 105 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 PIM3Q86V86 326 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 CAND1Q86VP6 1230 aaKnown RBP14.27□□□□□ -0.13
COMMD4-225ENST00000569245 RELL1Q8IUW5 271 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 SLC37A2Q8TED4 501 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 ANKRD7Q92527 254 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 CAVIN3Q969G5 261 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 SERPINB12Q96P63 405 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 VPS35Q96QK1 796 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 SLC38A3Q99624 504 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 STN1Q9H668 368 aaKnown RBP14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A7Q9HAW7 530 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A10Q9HAW8 530 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A8Q9HAW9 530 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 RDH14Q9HBH5 336 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 THSD1Q9NS62 852 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 KCNK4Q9NYG8 393 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 DNAJC16Q9Y2G8 782 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 PKD1L2Q7Z442 2459 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 ACACAQ13085 2346 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 AP3B1O00203 1094 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 KMOO15229 486 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 PPM1DO15297 605 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 TNFSF15O95150 251 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 CRTAMO95727 393 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 CPNE6O95741 557 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 EML2O95834 649 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 FAM153BP0C7A2 387 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 SLC2A4P14672 509 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 EIF2S3P41091 472 aaKnown RBP14.26□□□□□ -0.13
COMMD4-225ENST00000569245 MAGEA3P43357 314 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 TMEM115Q12893 351 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-225ENST00000569245 NFATC2Q13469 925 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 ITGA9Q13797 1035 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 PTPRCAPQ14761 206 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 SLMAPQ14BN4 828 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 TAF1AQ15573 450 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-225ENST00000569245 HIF1AQ16665 826 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 FAM153CQ494X1 144 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 NKAIN2Q5VXU1 208 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 RAB11FIP2Q7L804 512 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 LRRTM4Q86VH4 590 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 TRAPPC5Q8IUR0 188 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 PDIK1LQ8N165 341 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 OR4K2Q8NGD2 314 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 BRSK1Q8TDC3 778 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 AHCYL2Q96HN2 611 aaKnown RBP14.26□□□□□ -0.13
COMMD4-225ENST00000569245 NAF1Q96HR8 494 aaKnown RBP14.26□□□□□ -0.13
COMMD4-225ENST00000569245 SLC46A1Q96NT5 459 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 TXLNGYQ9BZA5 131 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 ZCCHC2Q9C0B9 1178 aaKnown RBP14.26□□□□□ -0.13
COMMD4-225ENST00000569245 CASS4Q9NQ75 786 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 PRDM8Q9NQV8 689 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 LHX6Q9UPM6 363 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 PCDHGA8Q9Y5G5 932 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 ZFHX4Q86UP3 3567 aa14.26□□□□□ -0.13
COMMD4-225ENST00000569245 A0A087WV48 116 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 A0A1W2PNU3 283 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 PMS2P1A4D2B8 440 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 GOLGA8MH3BSY2 632 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 PLD2O14939 933 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 CHUKO15111 745 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 DXOO77932 396 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 JMJD7P0C870 316 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF7P17097 686 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 VCLP18206 1134 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 CD1CP29017 333 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 CCKBRP32239 447 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 GRIA1P42261 906 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 PCBP4P57723 403 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 ERVPABLB-1P60509 514 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 PDE1BQ01064 536 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 HHEXQ03014 270 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 EIF3IQ13347 325 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 SEPT7Q16181 437 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 COL28A1Q2UY09 1125 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 KHDC1Q4VXA5 237 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 LDLRAP1Q5SW96 308 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 BEND6Q5SZJ8 279 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 FNBP1LQ5T0N5 605 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 FBXO38Q6PIJ6 1188 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 CENPUQ71F23 418 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 SLC9B2Q86UD5 537 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF761Q86XN6 746 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 SFRP1Q8N474 314 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 SNIP1Q8TAD8 396 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF398Q8TD17 642 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 LIN37Q96GY3 246 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 PWWP2AQ96N64 755 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 ARNT2Q9HBZ2 717 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 AKAP7Q9P0M2 348 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 SLC23A2Q9UGH3 650 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 TMPRSS11EQ9UL52 423 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms