RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SEMA4CQ9C0C4 833 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 STN1Q9H668 368 aaKnown RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 SLC40A1Q9NP59 571 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 PCDHGA4Q9Y5G9 962 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 TRBV5-4A0A0C4DH59 114 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 OR2AG2A6NM03 316 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 EFCAB7A8K855 629 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 STMND1H3BQB6 276 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 H7C0S8 307 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 CCL22O00626 93 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 STX7O15400 261 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 LIASO43766 372 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 KCNJ13O60928 360 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 POP7O75817 140 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 UBXN7O94888 489 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 AP2A1O95782 977 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 IDSP22304 550 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 CSTF2P33240 577 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH3-209ENST00000569080 CETN2P41208 172 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 TNNT3P45378 269 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 MAPK9P45984 424 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 LEPRP48357 1165 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 PRLHRP49683 370 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 RAB15P59190 212 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 PPP1CAP62136 330 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 MC2RQ01718 297 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 GTF2H3Q13889 308 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 SIX1Q15475 284 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 BCL7AQ4VC05 210 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 ANKS6Q68DC2 871 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 DUS1LQ6P1R4 473 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 CCDC81Q6ZN84 652 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 PRSS42Q7Z5A4 293 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 AMZ2Q86W34 360 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 FAM129CQ86XR2 697 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 NXPE1Q8N323 547 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 TXLNBQ8N3L3 684 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 RNF10Q8N5U6 811 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 LILRA3Q8N6C8 439 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 GDAP1Q8TB36 358 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 ZNF398Q8TD17 642 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 NCSTNQ92542 709 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 NKD1Q969G9 470 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 WBP1Q96G27 269 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 AHCYL2Q96HN2 611 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 DNAJC1Q96KC8 554 aaKnown RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 LINC00615Q96LM1 132 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 C9orf72Q96LT7 481 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 PPP1R2P1Q96PQ5 205 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 TAAR9Q96RI9 348 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 FERMT1Q9BQL6 677 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 TMEM121Q9BTD3 319 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 APMAPQ9HDC9 416 aa7.67□□□□□ -1.18
CDH3-209ENST00000569080 AKAP7Q9P0M2 348 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 FEZ2Q9UHY8 353 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 DNMT3AQ9Y6K1 912 aaPredicted RBP7.67□□□□□ -1.18
CDH3-209ENST00000569080 PIKFYVEQ9Y2I7 2098 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 GOLGA6L9A6NEM1 432 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 MGAT4DA6NG13 374 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 MROH6A6NGR9 719 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 C2orf81A6NN90 581 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 A8MU76 341 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 CAPN5O15484 640 aaPredicted RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 ARHGAP6O43182 974 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 KIF1CO43896 1103 aaKnown RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 CRTAMO95727 393 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 DLGAP3O95886 979 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 VIPP01282 170 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 PRSS56P0CW18 603 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 MTHFD1P11586 935 aaKnown RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 TYRP1P17643 537 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 VCLP18206 1134 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 AKT1P31749 480 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 CDKN1CP49918 316 aaPredicted RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 GSDMDP57764 484 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 CCZ1BP86790 482 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 CCZ1P86791 482 aaPredicted RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 PDE1BQ01064 536 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 PRPSAP1Q14558 356 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 RPE65Q16518 533 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 LONRF2Q1L5Z9 754 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 PARP6Q2NL67 630 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 P3H1Q32P28 736 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 FNBP1LQ5T0N5 605 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 METRNLQ641Q3 311 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 TMEM220Q6QAJ8 160 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 ZNF662Q6ZS27 426 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 ARHGEF18Q6ZSZ5 1173 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 DET1Q7L5Y6 550 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 TIPARPQ7Z3E1 657 aaKnown RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 SNX20Q7Z614 316 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 SLC13A5Q86YT5 568 aaPredicted RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 TRIM48Q8IWZ4 208 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 RBM12BQ8IXT5 1001 aaKnown RBP7.66□□□□□ -1.18
CDH3-209ENST00000569080 PIANPQ8IYJ0 282 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 ZNF843Q8N446 348 aa7.66□□□□□ -1.18
CDH3-209ENST00000569080 GLIS1Q8NBF1 620 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms