RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TAAR9Q96RI9 348 aa19.92■□□□□ 0.78
CLK3-225ENST00000569063 CPNE5Q9HCH3 593 aa19.92■□□□□ 0.78
CLK3-225ENST00000569063 NLE1Q9NVX2 485 aaPredicted RBP19.92■□□□□ 0.78
CLK3-225ENST00000569063 FOXJ2Q9P0K8 574 aa19.92■□□□□ 0.78
CLK3-225ENST00000569063 CRLS1Q9UJA2 301 aa19.92■□□□□ 0.78
CLK3-225ENST00000569063 ZNF148Q9UQR1 794 aa19.92■□□□□ 0.78
CLK3-225ENST00000569063 PCDHGA3Q9Y5H0 932 aa19.92■□□□□ 0.78
CLK3-225ENST00000569063 TEX51A0A1B0GUA7 166 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 MGAT4DA6NG13 374 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 B4E171 279 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 LIPCP11150 499 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 ITGALP20701 1170 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 PSMA3P25788 255 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 CD82P27701 267 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 TSPAN7P41732 249 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 HALP42357 657 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 MAPK9P45984 424 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 NFE2L1Q14494 772 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 SIX1Q15475 284 aaPredicted RBP19.91■□□□□ 0.78
CLK3-225ENST00000569063 BCL7AQ4VC05 210 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 SOWAHCQ53LP3 525 aaPredicted RBP19.91■□□□□ 0.78
CLK3-225ENST00000569063 FAM83HQ6ZRV2 1179 aaPredicted RBP19.91■□□□□ 0.78
CLK3-225ENST00000569063 DET1Q7L5Y6 550 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 PLXDC1Q8IUK5 500 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 NXPE1Q8N323 547 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 TRIM58Q8NG06 486 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 HEXDCQ8WVB3 486 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 CXorf40BQ96DE9 158 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 DNAJC1Q96KC8 554 aaKnown RBP19.91■□□□□ 0.78
CLK3-225ENST00000569063 LINC00615Q96LM1 132 aaPredicted RBP19.91■□□□□ 0.78
CLK3-225ENST00000569063 UBL7Q96S82 380 aaPredicted RBP19.91■□□□□ 0.78
CLK3-225ENST00000569063 ETNK1Q9HBU6 452 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 OGFRQ9NZT2 677 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 SLC30A1Q9Y6M5 507 aa19.91■□□□□ 0.78
CLK3-225ENST00000569063 MROH6A6NGR9 719 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.9■□□□□ 0.78
CLK3-225ENST00000569063 SGTAO43765 313 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 NRDCO43847 1150 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 UBXN7O94888 489 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 IFNB1P01574 187 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 RALBP11234 206 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 MC4RP32245 332 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 FDFT1P37268 417 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 VAC14Q08AM6 782 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 SNX1Q13596 522 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 POU6F1Q14863 301 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 CCNG2Q16589 344 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 DRICH1Q6PGQ1 229 aaPredicted RBP19.9■□□□□ 0.78
CLK3-225ENST00000569063 TAB3Q8N5C8 712 aaPredicted RBP19.9■□□□□ 0.78
CLK3-225ENST00000569063 BEND7Q8N7W2 519 aaPredicted RBP19.9■□□□□ 0.78
CLK3-225ENST00000569063 BMPERQ8N8U9 685 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 OR2L2Q8NH16 312 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 STYXQ8WUJ0 223 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 DCUN1D1Q96GG9 259 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 CCNL2Q96S94 520 aaPredicted RBP19.9■□□□□ 0.78
CLK3-225ENST00000569063 COPS8Q99627 209 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 DDA1Q9BW61 102 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 TLR10Q9BXR5 811 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 FAM96AQ9H5X1 160 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 OCIAD1Q9NX40 245 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 ZKSCAN5Q9Y2L8 839 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 PPP2R2CQ9Y2T4 447 aa19.9■□□□□ 0.78
CLK3-225ENST00000569063 MN1Q10571 1320 aaPredicted RBP19.9■□□□□ 0.78
CLK3-225ENST00000569063 TRBV5-4A0A0C4DH59 114 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 EFCAB7A8K855 629 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 A8MU76 341 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 CCL22O00626 93 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 SUN1O94901 812 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 C9P02748 559 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 ATP1B2P14415 290 aaPredicted RBP19.89■□□□□ 0.77
CLK3-225ENST00000569063 GPR18Q14330 331 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 TGIF1Q15583 401 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 RPE65Q16518 533 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 SNAP47Q5SQN1 464 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 ZFAND4Q86XD8 727 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 DTX1Q86Y01 620 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 CDKN2AIPNLQ96HQ2 116 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 PIH1D1Q9NWS0 290 aaKnown RBP19.89■□□□□ 0.77
CLK3-225ENST00000569063 SLC39A1Q9NY26 324 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 ACSL5Q9ULC5 683 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 DRG1Q9Y295 367 aaKnown RBP19.89■□□□□ 0.77
CLK3-225ENST00000569063 ZFYVE26Q68DK2 2539 aa19.89■□□□□ 0.77
CLK3-225ENST00000569063 IGLV3-16A0A075B6K0 115 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 CFAP99D6REC4 459 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 K7ENP7 123 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 ANKRD34CP0C6C1 535 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 AMD1P17707 334 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 PBLDP30039 288 aaPredicted RBP19.88■□□□□ 0.77
CLK3-225ENST00000569063 ARSDP51689 593 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 CDH17Q12864 832 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 SEMA5AQ13591 1074 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 SEPT6Q14141 434 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 ARHGAP40Q5TG30 622 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 INO80CQ6PI98 192 aaPredicted RBP19.88■□□□□ 0.77
CLK3-225ENST00000569063 XKR5Q6UX68 686 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 CCDC81Q6ZN84 652 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 FAM129CQ86XR2 697 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 OR52K1Q8NGK4 314 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 MAIP1Q8WWC4 291 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 ART4Q93070 314 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms