RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 LRRC69Q6ZNQ3 347 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 USP53Q70EK8 1073 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 DET1Q7L5Y6 550 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RAB11FIP2Q7L804 512 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 NXPE1Q8N323 547 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RASGEF1CQ8N431 466 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 FBXO39Q8N4B4 442 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 FGF11Q92914 225 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CXorf40BQ96DE9 158 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 COPS8Q99627 209 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CMKLR1Q99788 373 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 VPS37BQ9H9H4 285 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RDH14Q9HBH5 336 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 WASH6PQ9NQA3 447 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 POT1Q9NUX5 634 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SLC23A2Q9UGH3 650 aa12.75□□□□□ -0.37
TRAPPC2L-209ENST00000565205 MGAQ8IWI9 3026 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 MROH6A6NGR9 719 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 LILRA5A6NI73 299 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 AGAP14A8MT82 685 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CCL22O00626 93 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CASC3O15234 703 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 POP7O75817 140 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 JMJD7P0C870 316 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ZSCAN5DPP0CG00 497 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 XRCC1P18887 633 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CD1CP29017 333 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ABCG1P45844 678 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CTSCP53634 463 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 UBE2IP63279 158 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ZFP36L1Q07352 338 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TRA2AQ13595 282 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 BCL7AQ4VC05 210 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ABRAXAS1Q6UWZ7 409 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 NLRP9Q7RTR0 991 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TAS2R42Q7RTR8 314 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 C11orf96Q7Z7L8 435 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PRUNE1Q86TP1 453 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ZNF761Q86XN6 746 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RBM12BQ8IXT5 1001 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PRELID2Q8N945 189 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 GLIS1Q8NBF1 620 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 OR4D9Q8NGE8 314 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RANBP9Q96S59 729 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TTC1Q99614 292 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 FAM96AQ9H5X1 160 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 UCK1Q9HA47 277 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CASS4Q9NQ75 786 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ZDHHC3Q9NYG2 299 aa12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TTC7AQ9ULT0 858 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 MGAT4DA6NG13 374 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PRR19A6NJB7 356 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 F8W8V4 182 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CES2O00748 559 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TNFSF15O95150 251 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ATP1B2P14415 290 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ADRA1DP25100 572 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ACRV1P26436 265 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RPL10P27635 214 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CA5AP35218 305 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 MAPK9P45984 424 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 KCNJ1P48048 391 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PRAMEP78395 509 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CDK16Q00536 496 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SQSTM1Q13501 440 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CCDC38Q502W7 563 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TSTD2Q5T7W7 516 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TMEM71Q6P5X7 295 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 AFTPHQ6ULP2 937 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 BEND7Q8N7W2 519 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ZNF248Q8NDW4 579 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PEX13Q92968 403 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SGF29Q96ES7 293 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 OSBPL9Q96SU4 736 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ASCL3Q9NQ33 180 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 RIMKLBQ9ULI2 386 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SNX12Q9UMY4 172 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 LOXL2Q9Y4K0 774 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 ATMQ13315 3056 aa12.73□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TRBV5-4A0A0C4DH59 114 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 QSOX1O00391 747 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TLX3O43711 291 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SLC35G4P0C7Q5 338 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 TCP1P17987 556 aaKnown RBP12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PSMA3P25788 255 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 CSF2RBP32927 897 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 SLC19A1P41440 591 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 GRIA1P42261 906 aa12.72□□□□□ -0.37
TRAPPC2L-209ENST00000565205 PRLHRP49683 370 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms